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We develop deep Poisson-gamma dynamical systems (DPGDS) to model sequentially observed multivariate count data, improving previously proposed models by not only mining deep hierarchical latent structure from the data, but also capturing…

Machine Learning · Statistics 2019-01-03 Dandan Guo , Bo Chen , Hao Zhang , Mingyuan Zhou

The dynamics of biological polymers, including proteins, RNA, and DNA, occur in very high-dimensional spaces. Many naturally-occurring polymers can navigate a vast phase space and rapidly find their lowest free energy (folded) state. Thus,…

Computational Physics · Physics 2024-06-19 Frederico Campos Freitas , Sandra Byju , Asem Hassan , Ronaldo Junio de Oliveira , Paul C. Whitford

Dense cellular networks (DenseNets) are fast becoming a reality with the rapid deployment of base stations (BSs) aimed at meeting the explosive data traffic demand. In legacy systems however this comes with the penalties of higher network…

Information Theory · Computer Science 2017-02-21 Arman Shojaeifard , Kai-Kit Wong , Khairi Ashour Hamdi , Emad Alsusa , Daniel K. C. So , Jie Tang

We present the algorithmic details of the dynamical cluster approximation (DCA) algorithm. The DCA is a fully-causal approach which systematically restores non-local correlations to the dynamical mean field approximation (DMFA). The DCA is…

Strongly Correlated Electrons · Physics 2007-05-23 S. Moukouri , C. Huscroft , M. Jarrell

Self-organized network dynamics prevails for systems across physics, biology and engineering. How external signals generate distributed responses in networked systems fundamentally underlies their function, yet is far from fully understood.…

Adaptation and Self-Organizing Systems · Physics 2019-08-05 Xiaozhu Zhang , Sarah Hallerberg , Moritz Matthiae , Dirk Witthaut , Marc Timme

Planning is a powerful approach to control problems with known environment dynamics. In unknown environments the agent needs to learn a model of the system dynamics to make planning applicable. This is particularly challenging when the…

Machine Learning · Computer Science 2020-05-11 Nathanael Bosch , Jan Achterhold , Laura Leal-Taixé , Jörg Stückler

The rapidly increasing complexity of (mainly wireless) ad-hoc networks stresses the need of reliable distributed estimation of several variables of interest. The widely used centralized approach, in which the network nodes communicate their…

Information Theory · Computer Science 2015-03-20 K. Dedecius , V. Sečkárová

Generative diffusion models have achieved remarkable success in producing high-quality images. However, these models typically operate in continuous intensity spaces, diffusing independently across pixels and color channels. As a result,…

Graphics · Computer Science 2025-05-20 Javier E. Santos , Agnese Marcato , Roman Colman , Nicholas Lubbers , Yen Ting Lin

We show that the behavior of stochastic gradient descent is related to Bayesian statistics by showing that SGD is effectively diffusion on a fractal landscape, where the fractal dimension can be accounted for in a purely Bayesian way. By…

Machine Learning · Computer Science 2026-03-17 Max Hennick , Stijn De Baerdemacker

The application of numerical techniques to the study of energy landscapes of large systems relies on sufficient sampling of the stationary points. Since the number of stationary points is believed to grow exponentially with system size, we…

Statistical Mechanics · Physics 2014-12-11 Dhagash Mehta , Ciaran Hughes , Michael Kastner , David J Wales

The quasipotential is a natural generalization of the concept of energy functions to non-equilibrium systems. In the analysis of rare events in stochastic dynamics, it plays a central role in characterizing the statistics of transition…

Dynamical Systems · Mathematics 2020-12-17 Bo Lin , Qianxiao Li , Weiqing Ren

We study rough high-dimensional landscapes in which an increasingly stronger preference for a given configuration emerges. Such energy landscapes arise in glass physics and inference. In particular we focus on random Gaussian functions, and…

Disordered Systems and Neural Networks · Physics 2019-01-09 Valentina Ros , Gerard Ben Arous , Giulio Biroli , Chiara Cammarota

We study the asymptotics of a two-dimensional stochastic differential system with a degenerate diffusion matrix. This system describes the dynamics of a population where individuals contribute to the degradation of their environment through…

Dynamical Systems · Mathematics 2024-05-06 Pierre Collet , Claire Ecotière , Sylvie Méléard

Far from equilibrium, neural systems self-organize across multiple scales. Exploiting multiscale self-organization in neuroscience and artificial intelligence requires a computational framework for modeling the effective non-equilibrium…

Neurons and Cognition · Quantitative Biology 2025-10-09 Nathan X. Kodama

We propose a novel diffusion map particle system (DMPS) for generative modeling, based on diffusion maps and Laplacian-adjusted Wasserstein gradient descent (LAWGD). Diffusion maps are used to approximate the generator of the corresponding…

Machine Learning · Statistics 2024-12-19 Fengyi Li , Youssef Marzouk

We study charge fluctuations of a family of stochastic charged cellular automata away from the deterministic single-file limit and obtain the exact typical charge probability distributions, known to be anomalous, using hydrodynamics. The…

Statistical Mechanics · Physics 2025-06-06 Takato Yoshimura , Žiga Krajnik

Many systems in biology, physics and engineering can be described by systems of ordinary differential equation containing many parameters. When studying the dynamic behavior of these large, nonlinear systems, it is useful to identify and…

Molecular Networks · Quantitative Biology 2016-04-13 Heather A. Harrington , Dhagash Mehta , Helen M. Byrne , Jonathan D. Hauenstein

Complex networks are characterized by latent geometries induced by their topology or by the dynamics on the top of them. In the latter case, different network-driven processes induce distinct geometric features that can be captured by…

Physics and Society · Physics 2021-04-07 Giulia Bertagnolli , Manlio De Domenico

Extracting typical operational scenarios is essential for making flexible decisions in the dispatch of a new power system. This study proposed a novel deep time series aggregation scheme (DTSAs) to generate typical operational scenarios,…

Machine Learning · Computer Science 2025-04-08 Zhaoyang Qu , Zhenming Zhang , Nan Qu , Yuguang Zhou , Yang Li , Tao Jiang , Min Li , Chao Long

Stochastic differential equations describe well many physical, biological and sociological systems, despite the simplification often made in their derivation. Here the usage of simple stochastic differential equations to characterize and…

Data Analysis, Statistics and Probability · Physics 2016-07-27 Daniel Pumpe , Maksim Greiner , Ewald Müller , Torsten A. Enßlin