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Related papers: Accelerating Maximal Biclique Enumeration on GPUs

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Maximal Clique Enumeration (MCE) is a fundamental graph mining problem, and is useful as a primitive in identifying dense structures in a graph. Due to the high computational cost of MCE, parallel methods are imperative for dealing with…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-01-31 Apurba Das , Seyed-Vahid Sanei-Mehri , Srikanta Tirthapura

Counting (p,q)-bicliques in bipartite graphs poses a foundational challenge with broad applications, from densest subgraph discovery in algorithmic research to personalized content recommendation in practical scenarios. Despite its…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-03-21 Linshan Qiu , Zhonggen Li , Xiangyu Ke , Lu Chen , Yunjun Gao

We present shared-memory parallel methods for Maximal Clique Enumeration (MCE) from a graph. MCE is a fundamental and well-studied graph analytics task, and is a widely used primitive for identifying dense structures in a graph. Due to its…

Data Structures and Algorithms · Computer Science 2020-01-30 Apurba Das , Seyed-Vahid Sanei-Mehri , Srikanta Tirthapura

We present a GPU solution for exact maximal clique enumeration (MCE) that performs a search tree traversal following the Bron-Kerbosch algorithm. Prior works on parallelizing MCE on GPUs perform a breadth-first traversal of the tree, which…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-04-25 Mohammad Almasri , Yen-Hsiang Chang , Izzat El Hajj , Rakesh Nagi , Jinjun Xiong , Wen-mei Hwu

The maximal clique enumeration (MCE) problem has numerous applications in biology, chemistry, sociology, and graph modeling. Though this problem is well studied, most current research focuses on finding solutions in large sparse graphs or…

Data Structures and Algorithms · Computer Science 2018-01-03 Pablo San Segundo , Jorge Artieda , Darren Strash

As a fundamental task in graph data management, maximal clique enumeration (MCE) has attracted extensive attention from both academic and industrial communities due to its wide range of applications. However, MCE is very challenging as the…

Databases · Computer Science 2023-11-03 Wen Deng , Weiguo Zheng , Hong Cheng

We consider the enumeration of maximal bipartite cliques (bicliques) from a large graph, a task central to many practical data mining problems in social network analysis and bioinformatics. We present novel parallel algorithms for the…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-04-22 Arko Provo Mukherjee , Srikanta Tirthapura

The maximal biclique enumeration problem in bipartite graphs is fundamental and has numerous applications in E-commerce and transaction networks. Most existing studies adopt a branch-and-bound framework, which recursively expands a partial…

Data Structures and Algorithms · Computer Science 2026-02-26 Kaixin Wang , Kaiqiang Yu , Cheng Long

Enumerating maximal $k$-biplexes (MBPs) of a bipartite graph has been used for applications such as fraud detection. Nevertheless, there usually exists an exponential number of MBPs, which brings up two issues when enumerating MBPs, namely…

Databases · Computer Science 2022-08-30 Kaiqiang Yu , Cheng Long

Identifying a biclique with the maximum number of edges bears considerable implications for numerous fields of application, such as detecting anomalies in E-commerce transactions, discerning protein-protein interactions in biology, and…

Quantum Physics · Physics 2023-09-12 Xiaofan Li , Prasenjit Mitra , Rui Zhou , Wolfgang Nejdl

To fully exploit the performance potential of modern multi-core processors, machine learning and data mining algorithms for big data must be parallelized in multiple ways. Today's CPUs consist of multiple cores, each following an…

Machine Learning · Computer Science 2020-11-09 Christian Böhm , Claudia Plant

Maximal biclique enumeration is a fundamental problem in bipartite graph data analysis. Existing biclique enumeration methods mainly focus on non-attributed bipartite graphs and also ignore the \emph{fairness} of graph attributes. In this…

Data Structures and Algorithms · Computer Science 2023-03-08 Ziqi Yin , Qi Zhang , Wentao Zhang , Rong-Hua Li , Guoren Wang

Maximal clique enumeration (MCE) is crucial for tasks like community detection and biological network analysis. Existing algorithms typically adopt the branch-and-bound framework with the vertex-oriented Bron-Kerbosch (BK) branching…

Databases · Computer Science 2024-12-12 Kaixin Wang , Kaiqiang Yu , Cheng Long

Bipartite graphs are a prevalent modeling tool for real-world networks, capturing interactions between vertices of two different types. Within this framework, bicliques emerge as crucial structures when studying dense subgraphs: they are…

Data Structures and Algorithms · Computer Science 2024-05-27 Alexis Baudin , Clémence Magnien , Lionel Tabourier

Identifying dense bipartite subgraphs is a common graph data mining task. Many applications focus on the enumeration of all maximal bicliques (MBs), though sometimes the stricter variant of maximal induced bicliques (MIBs) is of interest.…

Data Structures and Algorithms · Computer Science 2019-03-06 Blair D. Sullivan , Andrew van der Poel , Trey Woodlief

Finding cohesive subgraphs in a large graph has many important applications, such as community detection and biological network analysis. Clique is often a too strict cohesive structure since communities or biological modules rarely form as…

Data Structures and Algorithms · Computer Science 2024-06-11 Qihao Cheng , Da Yan , Tianhao Wu , Lyuheng Yuan , Ji Cheng , Zhongyi Huang , Yang Zhou

Cosmological large scale structure $N$-body simulations are computation-light, memory-heavy problems in supercomputing. The considerable amount of memory is usually dominated by an inefficient way of storing more than sufficient phase space…

Cosmology and Nongalactic Astrophysics · Physics 2018-07-31 Hao-Ran Yu , Ue-Li Pen , Xin Wang

Betweenness Centrality (BC) is steadily growing in popularity as a metrics of the influence of a vertex in a graph. The BC score of a vertex is proportional to the number of all-pairs-shortest-paths passing through it. However, complete and…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-02-22 Flavio Vella , Giancarlo Carbone , Massimo Bernaschi

Writing high performance solvers for engineering applications is a delicate task. These codes are often developed on an application to application basis, highly optimized to solve a certain problem. Here, we present our work on developing a…

Computational Engineering, Finance, and Science · Computer Science 2018-08-14 Niclas Jansson , Rahul Bale , Keiji Onishi , Makoto Tsubokura

Maximal clique enumeration (MCE) is a fundamental problem in graph theory and is used in many applications, such as social network analysis, bioinformatics, intelligent agent systems, cyber security, etc. Most existing MCE algorithms focus…

Databases · Computer Science 2020-12-01 Xiaofan Li , Rui Zhou , Lu Chen , Chengfei Liu , Qiang He , Yun Yang
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