Related papers: Reconstruction of hypermatrices from subhypermatri…
Given two strings $S$ and $P$, the Episode Matching problem is to find the shortest substring of $S$ that contains $P$ as a subsequence. The best known upper bound for this problem is $\tilde O(nm)$ by Das et al. (1997) , where $n,m$ are…
We study the problem of determining the minimum number $f(n,k,d)$ of affine subspaces of codimension $d$ that are required to cover all points of $\mathbb{F}_2^n\setminus \{\vec{0}\}$ at least $k$ times while covering the origin at most…
We consider the following k-sparse recovery problem: design an m x n matrix A, such that for any signal x, given Ax we can efficiently recover x' satisfying ||x-x'||_1 <= C min_{k-sparse} x"} ||x-x"||_1. It is known that there exist…
A classical open problem in combinatorial geometry is to obtain tight asymptotic bounds on the maximum number of k-level vertices in an arrangement of n hyperplanes in d dimensions (vertices with exactly k of the hyperplanes passing below…
In the $(k,m)$-mappability problem, for a given sequence $T$ of length $n$, the goal is to compute a table whose $i$th entry is the number of indices $j \ne i$ such that the length-$m$ substrings of $T$ starting at positions $i$ and $j$…
We study the minimal dimension of maximal commutative subalgebras of the matrix algebra $M_n(k)$ over an algebraically closed field. While examples with dimension strictly smaller than n are known for $n \geq 14$, no such examples are known…
We consider the minimum vertex cover problem in hypergraphs in which every hyperedge has size k (also known as minimum hitting set problem, or minimum set cover with element frequency k). Simple algorithms exist that provide…
We prove that for any real-valued matrix $X \in \R^{m \times n}$, and positive integers $r \ge k$, there is a subset of $r$ columns of $X$ such that projecting $X$ onto their span gives a $\sqrt{\frac{r+1}{r-k+1}}$-approximation to best…
The $d$-Hitting Set problem is a fundamental problem in parameterized complexity, which asks whether a given hypergraph contains a vertex subset $S$ of size at most $k$ that intersects every hyperedge (i.e., $S \cap e \neq \emptyset$ for…
The longest common substring with $k$-mismatches problem is to find, given two strings $S_1$ and $S_2$, a longest substring $A_1$ of $S_1$ and $A_2$ of $S_2$ such that the Hamming distance between $A_1$ and $A_2$ is $\le k$. We introduce a…
The sequence reconstruction problem asks for the recovery of a sequence from multiple noisy copies, where each copy may contain up to $r$ errors. In the case of permutations on \(n\) letters under the Hamming metric, this problem is closely…
We consider two optimization problems related to finding dense subgraphs. The densest at-least-k-subgraph problem (DalkS) is to find an induced subgraph of highest average degree among all subgraphs with at least k vertices, and the densest…
Let $d$ and $k$ be integers with $1 \leq k \leq d-1$. Let $\Lambda$ be a $d$-dimensional lattice and let $K$ be a $d$-dimensional compact convex body symmetric about the origin. We provide estimates for the minimum number of $k$-dimensional…
Given an $H$-minor-free graph $G$ and an integer $k$, our main technical contribution is sampling in randomized polynomial time an induced subgraph $G'$ of $G$ and a tree decomposition of $G'$ of width $\widetilde{O}(k)$ such that for every…
Given a threshold $L$ and a set $\mathcal{R} = \{R_1, \ldots, R_m\}$ of $m$ haplotype sequences, each having length $n$, the minimum segmentation problem for founder reconstruction is to partition the sequences into disjoint segments…
An order-$s$ Davenport-Schinzel sequence over an $n$-letter alphabet is one avoiding immediate repetitions and alternating subsequences with length $s+2$. The main problem is to determine the maximum length of such a sequence, as a function…
We examine the open problem of finding the shortest string that contains each of the n! permutations of n symbols as contiguous substrings (i.e., the shortest superpermutation on n symbols). It has been conjectured that the shortest…
We consider the problem of computing the data-cube marginals of a fixed order $k$ (i.e., all marginals that aggregate over $k$ dimensions), using a single round of MapReduce. The focus is on the relationship between the reducer size (number…
The function h(k) represents the smallest number m such that every sequence of m consecutive integers contains an integer coprime to the first k primes. We give a new computational method for calculating strong upper bounds on h(k).
In the trace reconstruction problem our goal is to learn an unknown string $x\in \{0,1\}^n$ given independent traces of $x$. A trace is obtained by independently deleting each bit of $x$ with some probability $\delta$ and concatenating the…