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Parallel programming remains a daunting challenge, from the struggle to express a parallel algorithm without cluttering the underlying synchronous logic, to describing which devices to employ in a calculation, to correctness. Over the…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-08-10 Patrick Diehl , Steven R. Brandt , Hartmut Kaiser

Many interesting phenomena are characterized by the complex interaction of different physical processes, each often best modeled numerically via a specific approach. In this paper, we present the design and implementation of an…

Mathematical Software · Computer Science 2025-10-20 Juan Michael Sargado

As scientific applications extend to the simulation of more and more complex systems, they involve an increasing number of abstraction levels, at each of which errors can emerge and across which they can propagate; tools for correctness…

Software Engineering · Computer Science 2011-01-18 Eloisa Bentivegna , Gabrielle Allen , Oleg Korobkin , Erik Schnetter

Motivation: Recent advances in single-cell analysis have introduced new computational challenges. Researchers often need to use multiple analysis tools written in different programming languages while managing version conflicts between…

Genomics · Quantitative Biology 2025-08-12 Ryuichiro Nakato , Luis Augusto Eijy Nagai

Lattice QCD calculations require significant computational effort, with the dominant fraction of resources typically spent in the numerical inversion of the Dirac operator. One of the simplest methods to solve such large and sparse linear…

High Energy Physics - Lattice · Physics 2021-12-01 Salvatore Cali , William Detmold , Grzegorz Korcyl , Piotr Korcyl , Phiala Shanahan

Currently, data-intensive scientific applications require vast amounts of compute resources to deliver world-leading science. The climate emergency has made it clear that unlimited use of resources (e.g., energy) for scientific discovery is…

Instrumentation and Methods for Astrophysics · Physics 2024-12-12 P. Chris Broekema , Rob V. van Nieuwpoort

Software comprehension can be extremely time-consuming due to the ever-growing size of codebases. Consequently, there is an increasing need to accelerate the code comprehension process to facilitate maintenance and reduce associated costs.…

Software Engineering · Computer Science 2024-01-15 Krzysztof Borowski , Bartosz Baliś , Tomasz Orzechowski

The performance of graph programs depends highly on the algorithm, the size and structure of the input graphs, as well as the features of the underlying hardware. No single set of optimizations or one hardware platform works well across all…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-01-11 Ajay Brahmakshatriya , Yunming Zhang , Changwan Hong , Shoaib Kamil , Julian Shun , Saman Amarasinghe

In this proceedings we discuss the motivation, implementation details, and performance of a new physics code base called Grid. It is intended to be more performant, more general, but similar in spirit to QDP++\cite{QDP}. Our approach is to…

High Energy Physics - Lattice · Physics 2015-12-14 Peter Boyle , Azusa Yamaguchi , Guido Cossu , Antonin Portelli

Automated code generation remains a persistent challenge in software engineering, as conventional multi-agent frameworks are often constrained by static planning, isolated execution, high computational overhead, and limited adaptability to…

Software Engineering · Computer Science 2026-04-21 Duy Tung Doan , Quang Huy Phung , Dzung Nguyen , Khac-Hoai Nam Bui

In software development through integrated development environments (IDEs), code completion is one of the most widely used features. Nevertheless, majority of integrated development environments only support completion of methods and APIs,…

Computation and Language · Computer Science 2020-11-02 Alexey Svyatkovskiy , Shao Kun Deng , Shengyu Fu , Neel Sundaresan

Distributed implementations are crucial in speeding up large scale machine learning applications. Distributed gradient descent (GD) is widely employed to parallelize the learning task by distributing the dataset across multiple workers. A…

Information Theory · Computer Science 2021-03-02 Baturalp Buyukates , Emre Ozfatura , Sennur Ulukus , Deniz Gunduz

The C++ programming language is not only a keystone of the high-performance-computing ecosystem but has proven to be a successful base for portable parallel-programming frameworks. As is well known, C++ programmers use templates to…

Programming Languages · Computer Science 2019-04-30 Hal Finkel , David Poliakoff , David F. Richards

Binary code analysis is widely used to assess a program's correctness, performance, and provenance. Binary analysis applications often construct control flow graphs, analyze data flow, and use debugging information to understand how machine…

Sparse graphs are ubiquitous in real and virtual worlds. With the phenomenal growth in semi-structured and unstructured data, sizes of the underlying graphs have witnessed a rapid growth over the years. Analyzing such large structures…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-01-08 Ashwina Kumar , M. Venkata Krishna , Prasanna Bartakke , Rahul Kumar , Rajesh Pandian M , Nibedita Behera , Rupesh Nasre

Developers of Molecular Dynamics (MD) codes face significant challenges when adapting existing simulation packages to new hardware. In a continuously diversifying hardware landscape it becomes increasingly difficult for scientists to be…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-03-14 William R. Saunders , James Grant , Eike H. Müller

The quantum computer has become contemporary reality, with the first two-qubit machine of mere decades ago transforming into cloud-accessible devices with tens, hundreds, or -- in a few cases -- even thousands of qubits. While such hardware…

Programming is a powerful and ubiquitous problem-solving tool. Developing systems that can assist programmers or even generate programs independently could make programming more productive and accessible, yet so far incorporating…

Floating-point arithmetic plays a central role in science, engineering, and finance by enabling developers to approximate real arithmetic. To address numerical issues in large floating-point applications, developers must identify root…

Programming Languages · Computer Science 2018-07-02 Alex Sanchez-Stern , Pavel Panchekha , Sorin Lerner , Zachary Tatlock

Cloud computing aims to power the next generation data centers and enables application service providers to lease data center capabilities for deploying applications depending on user QoS (Quality of Service) requirements. Cloud…

Distributed, Parallel, and Cluster Computing · Computer Science 2009-07-29 Rajkumar Buyya , Rajiv Ranjan , Rodrigo N. Calheiros
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