Related papers: TOPCAT Corner Plot
Transformer-based models have significantly advanced natural language processing and computer vision in recent years. However, due to the irregular and disordered structure of point cloud data, transformer-based models for 3D deep learning…
Computational topology is a vibrant contemporary subfield and this article integrates knot theory and mathematical visualization. Previous work on computer graphics developed a sequence of smooth knots that were shown to converge point wise…
This article describes a data center hosting a web portal for accessing and sharing the output of large, cosmological, hydro-dynamical simulations with a broad scientific community. It also allows users to receive related scientific data…
In spite of showing unreasonable effectiveness in modalities like Text and Image, Deep Learning has always lagged Gradient Boosting in tabular data - both in popularity and performance. But recently there have been newer models created…
The value proposition of a dataset often resides in the implicit interconnections or explicit relationships (patterns) among individual entities, and is often modeled as a graph. Effective visualization of such graphs can lead to key…
In this paper, a function on any pair of graphs is defined whose properties are similar to the properties of dot product in vector space. This function enables us to define graph orthogonality and, also, a new metric on isomorphism classes…
This paper describes a new kind of knowledge representation and mining system which we are calling the Semantic Knowledge Graph. At its heart, the Semantic Knowledge Graph leverages an inverted index, along with a complementary uninverted…
Ontologies represent the conceptual knowledge of a domain. At the core of an ontology is the taxonomy of concepts and subconcepts that represent specific entities, which can be complex to build. In many cases, information is available in…
Purpose: As interest in CEST-MRI grows, particularly in the preclinical setting, the necessity for standardized and easy-to-use acquisition and data analysis pipelines has become apparent. While vendors have increasingly introduced support…
Representing the control flow of a computer program as a computation graph can bring many benefits in a broad variety of domains where performance is critical. This technique is a core component of most major numerical libraries…
TAP, the Table Access Protocol, is a widely used Virtual Observatory specification allowing client software to interact with remote database services in a standardised way. This paper presents taplint, a tool for assessing the compliance of…
Bottom-up layout algorithms for compound graphs are suitable for presenting the microscale view of models and are often used in model-driven engineering. However, they have difficulties at the macroscale where maintaining the overview of…
Quantum circuits constructed from Josephson junctions and superconducting electronics are key to many quantum computing and quantum optics applications. Designing these circuits involves calculating the Hamiltonian describing their quantum…
Scientific data sets continue to increase in both size and complexity. In the past, dedicated graphics systems at supercomputing centers were required to visualize large data sets, but as the price of commodity graphics hardware has dropped…
The central nervous system is composed of many individual units -- from cells to areas -- that are connected with one another in a complex pattern of functional interactions that supports perception, action, and cognition. One natural and…
Hive plots are a graph visualization style placing vertices on a set of radial axes emanating from a common center and drawing edges as smooth curves connecting their respective endpoints. In previous work on hive plots, assignment to an…
Knot diagrams are among the most common visual tools in topology. Computer programs now make it possible to draw, manipulate and render them digitally, which proves to be useful in knot theory teaching and research. Still, an openly…
Nexus-CAT (Cluster Analysis Toolkit) is an open-source Python package for cluster detection and percolation analysis of atomistic simulation trajectories. Standard structural tools, such as the pair distribution function or structure…
LoKit is a toolkit based on the coordination language LO. It allows to build distributed collaborative applications by providing a set of generic tools. This paper briefly introduces the concept of the toolkit, presents a subset of the…
AMDAT (Amorphous Molecular Dynamics Analysis Toolkit) is an open-source C++ toolkit for post-processing molecular dynamics trajectories, focused on high-performance static and dynamic analyses of amorphous, glassy, and polymer materials,…