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Gene expression depends on thousands of factors and we usually only have access to tens or hundreds of observations of gene expression levels meaning we are in a high-dimensional setting. Additionally we don't always observe or care about…

Applications · Statistics 2017-04-04 Emiliano Diaz

Factor models are widely used to reduce dimensionality in modeling high-dimensional data. However, there remains a need for models that can be reliably fit in modest sample sizes and are identifiable, interpretable, and flexible. To address…

Methodology · Statistics 2025-06-19 Maoran Xu , Steven Winter , Amy H. Herring , David B. Dunson

Dimension reduction techniques are among the most essential analytical tools in the analysis of high-dimensional data. Generalized principal component analysis (PCA) is an extension to standard PCA that has been widely used to identify…

This paper considers statistical inference for the explained variance $\beta^{\intercal}\Sigma \beta$ under the high-dimensional linear model $Y=X\beta+\epsilon$ in the semi-supervised setting, where $\beta$ is the regression vector and…

Methodology · Statistics 2020-12-01 T. Tony Cai , Zijian Guo

The R package GFA provides a full pipeline for factor analysis of multiple data sources that are represented as matrices with co-occurring samples. It allows learning dependencies between subsets of the data sources, decomposed into latent…

Mathematical Software · Computer Science 2016-11-08 Eemeli Leppäaho , Muhammad Ammad-ud-din , Samuel Kaski

This paper uses Factored Latent Analysis (FLA) to learn a factorized, segmental representation for observations of tracked objects over time. Factored Latent Analysis is latent class analysis in which the observation space is subdivided and…

Machine Learning · Computer Science 2012-07-19 Chris Stauffer

In semivarying coefficient models for longitudinal/clustered data, usually of primary interest is usually the parametric component which involves unknown constant coefficients. First, we study semiparametric efficiency bound for estimation…

Methodology · Statistics 2015-09-15 Ming-Yen Cheng , Toshio Honda , Jialiang Li

Total Flow Analysis (TFA) is a method for conducting the worst-case analysis of time sensitive networks without cyclic dependencies. In networks with cyclic dependencies, Fixed-Point TFA introduces artificial cuts, analyses the resulting…

Networking and Internet Architecture · Computer Science 2022-05-12 Stéphan Plassart , Jean-Yves Le Boudec

Canonical correlation analysis (CCA) is a classical representation learning technique for finding correlated variables in multi-view data. Several nonlinear extensions of the original linear CCA have been proposed, including kernel and deep…

Machine Learning · Computer Science 2016-02-09 Tomer Michaeli , Weiran Wang , Karen Livescu

Hierarchical factor models, which include the bifactor model as a special case, are useful in social and behavioural sciences for measuring hierarchically structured constructs. Specifying a hierarchical factor model involves imposing…

Methodology · Statistics 2026-01-06 Jiawei Qiao , Yunxiao Chen , Zhiliang Ying

Covariance Structure Analysis (CSA) or Structural Equation Modeling (SEM) is critical for political scientists measuring latent structural relationships, allowing for the simultaneous assessment of both latent and observed variables,…

Methodology · Statistics 2024-11-20 Bang Quan Zheng , Peter M. Bentler

In model-based clustering and classification, the cluster-weighted model constitutes a convenient approach when the random vector of interest constitutes a response variable Y and a set p of explanatory variables X. However, its…

Methodology · Statistics 2013-07-23 Sanjeena Subedi , Antonio Punzo , Salvatore Ingrassia , Paul D. McNicholas

We propose a new matrix factor model, named RaDFaM, which is strictly derived based on the general rank decomposition and assumes a structure of a high-dimensional vector factor model for each basis vector. RaDFaM contributes a novel class…

Methodology · Statistics 2024-02-14 Xu Zhang , Catherine C. Liu , Jianhua Guo , K. C. Yuen , A. H. Welsh

Static code analysis (SCA) tools are widely used as effective ways to detect bugs and vulnerabilities in software systems. However, the reports generated by these tools often contain a large number of non-actionable findings, which can…

Software Engineering · Computer Science 2026-04-21 Tamás Aladics , Norbert Vándor , Rudolf Ferenc , Péter Hegedűs

In this paper, we propose a novel method for causal inference within the framework of counterfactual and synthetic control. Matching forward the generalized synthetic control method, our instrumented principal component analysis method…

Econometrics · Economics 2024-09-17 Cong Wang

Federated learning enables collaborative model training across distributed data sources but suffers from slow convergence under non-IID data conditions. Existing solutions employ algorithmic modifications treating all client updates…

Machine Learning · Computer Science 2025-12-19 Jahidul Arafat

In some multivariate problems with missing data, pairs of variables exist that are never observed together. For example, some modern biological tools can produce data of this form. As a result of this structure, the covariance matrix is…

Methodology · Statistics 2013-08-13 Max Grazier G'Sell , Shai S. Shen-Orr , Robert Tibshirani

Motivation: Protein function prediction is a challenging task and an open problem in computational biology. The Critical Assessment of protein Function Annotation (CAFA) is a triennial, community-driven initiative that provides an…

Quantitative Methods · Quantitative Biology 2026-04-23 An Phan , Yanli Wang , Frimpong Boadu , Maxat Kulmanov , Robert Hoehndorf , Jianlin Cheng , Predrag Radivojac , Iddo Friedberg

Semiparametric accelerated failure time (AFT) models directly relate the predicted failure times to covariates and are a useful alternative to models that work on the hazard function or the survival function. For case-cohort data, much less…

Computation · Statistics 2022-12-15 Steven Chiou , Sangwook Kang , Jun Yan

Principal component analysis (PCA) is a classical and widely used method for dimensionality reduction, with applications in data compression, computer vision, pattern recognition, and signal processing. However, PCA is designed for…

Methodology · Statistics 2025-10-01 Wenhui Wu , Changchun Shang , Jianhua Zhao , Xuan Ma , Yue Wang
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