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Recurrent neural networks (RNNs) are a powerful approach for time series prediction. However, their performance is strongly affected by their architecture and hyperparameter settings. The architecture optimization of RNNs is a…
We are interested in the design of generative networks. The training of these mathematical structures is mostly performed with the help of adversarial (min-max) optimization problems. We propose a simple methodology for constructing such…
In recent years, there is a growing need to train machine learning models on a huge volume of data. Designing efficient distributed optimization algorithms for empirical risk minimization (ERM) has therefore become an active and challenging…
This work presents RNAdiffusion, a latent diffusion model for generating and optimizing discrete RNA sequences of variable lengths. RNA is a key intermediary between DNA and protein, exhibiting high sequence diversity and complex…
The design space of networked embedded systems is very large, posing challenges to the optimisation of such platforms when it comes to support applications with real-time guarantees. Recent research has shown that a number of inter-related…
Classical lens design minimizes optical aberrations to produce sharp images, but is typically decoupled from downstream computer vision tasks. Existing end-to-end optical design learns optical encoding through joint optimization, but often…
The optimization of nuclear engineering designs, such as nuclear fuel assembly configurations, involves managing competing objectives like reactivity control and power distribution. This study explores the use of Optimization by Prompting,…
We focus on interval algorithms for computing guaranteed enclosures of the solutions of constrained global optimization problems where differential constraints occur. To solve such a problem of global optimization with nonlinear ordinary…
Neural Architecture Search (NAS) continues to serve a key roll in the design and development of neural networks for task specific deployment. Modern NAS techniques struggle to deal with ever increasing search space complexity and compute…
In the hardware design space exploration process, it is critical to optimize both hardware parameters and algorithm-to-hardware mappings. Previous work has largely approached this simultaneous optimization problem by separately exploring…
This paper deals with the distributed processing in the search for an optimum classification model using evolutionary product unit neural networks. For this distributed search we used a cluster of computers. Our objective is to obtain a…
Automatic Chemical Design is a framework for generating novel molecules with optimized properties. The original scheme, featuring Bayesian optimization over the latent space of a variational autoencoder, suffers from the pathology that it…
The locations of different mRNA molecules can be revealed by multiplexed in situ RNA detection. By assigning detected mRNA molecules to individual cells, it is possible to identify many different cell types in parallel. This in turn enables…
In the Minimum Common String Partition Problem (MCSP), we are given two strings on input, and we want to partition both into the same collection of substrings, minimizing the number of the substrings in the partition. This combinatorial…
This paper introduces a new method of partitioning the solution space of a multi-objective optimisation problem for parallel processing, called Efficient Projection Partitioning. This method projects solutions down into a single dimension,…
Mobile edge computing (MEC) is considered as an efficient method to relieve the computation burden of mobile devices. In order to reduce the energy consumption and time delay of mobile devices (MDs) in MEC, multiple users multiple input and…
Non-orthogonal multiple access (NOMA) and beamforming are well-established techniques for enabling massive connectivity in future wireless networks. However, many optimal beamforming solutions rely on highly complex iterative algorithms and…
A popular approach to protein design is to combine a generative model with a discriminative model for conditional sampling. The generative model samples plausible sequences while the discriminative model guides a search for sequences with…
Computational methods for discovering patterns of local correlations in sequences are important in computational biology. Here we show how to determine the optimal partitioning of aligned sequences into non-overlapping segments such that…
Traditional Bayesian random partition models assume that the size of each cluster grows linearly with the number of data points. While this is appealing for some applications, this assumption is not appropriate for other tasks such as…