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We introduce a variation of the scheduling with precedence constraints problem that has applications to molecular folding and production management. We are given a bipartite graph $H=(B,S)$. Vertices in $B$ are thought of as goods or…

Discrete Mathematics · Computer Science 2016-10-04 Akbar Rafiey , Jeff Kinne , Ján Manuch , Arash Rafiey

In this work, we study the problem of partitioning a set of graphs into different groups such that the graphs in the same group are similar while the graphs in different groups are dissimilar. This problem was rarely studied previously,…

Machine Learning · Computer Science 2023-02-07 Jinyu Cai , Yi Han , Wenzhong Guo , Jicong Fan

Finding all maximal $k$-plexes on networks is a fundamental research problem in graph analysis due to many important applications, such as community detection, biological graph analysis, and so on. A $k$-plex is a subgraph in which every…

Data Structures and Algorithms · Computer Science 2022-05-03 Qiangqiang Dai , Rong-Hua Li , Hongchao Qin , Meihao Liao , Guoren Wang

In the graph clustering problem with a planted solution, the input is a graph on $n$ vertices partitioned into $k$ clusters, and the task is to infer the clusters from graph structure. A standard assumption is that clusters induce…

Data Structures and Algorithms · Computer Science 2025-11-24 Hendrik Fichtenberger , Michael Kapralov , Ekaterina Kochetkova , Silvio Lattanzi , Davide Mazzali , Weronika Wrzos-Kaminska

This work introduces a hybrid quantum-classical method to correlation clustering, a graph-based unsupervised learning task that seeks to partition the nodes in a graph based on pairwise agreement and disagreement. In particular, we adapt…

Hypergraphs, increasingly utilised to model complex and diverse relationships in modern networks, have gained significant attention for representing intricate higher-order interactions. Among various challenges, cohesive subgraph discovery…

Social and Information Networks · Computer Science 2025-07-14 Dahee Kim , Hyewon Kim , Song Kim , Minseok Kim , Junghoon Kim , Yeon-Chang Lee , Sungsu Lim

The k-means clustering algorithm is a popular algorithm that partitions data into k clusters. There are many improvements to accelerate the standard algorithm. Most current research employs upper and lower bounds on point-to-cluster…

Machine Learning · Computer Science 2024-10-22 Andreas Lang , Erich Schubert

Partitioning a graph into blocks of "roughly equal" weight while cutting only few edges is a fundamental problem in computer science with a wide range of applications. In particular, the problem is a building block in applications that…

Data Structures and Algorithms · Computer Science 2021-05-06 Lars Gottesbüren , Tobias Heuer , Peter Sanders , Christian Schulz , Daniel Seemaier

Constrained clustering leverages limited domain knowledge to improve clustering performance and interpretability, but incorporating pairwise must-link and cannot-link constraints is an NP-hard challenge, making global optimization…

Machine Learning · Computer Science 2025-10-28 Pedro Chumpitaz-Flores , My Duong , Cristobal Heredia , Kaixun Hua

Clustering is an important topic in algorithms, and has a number of applications in machine learning, computer vision, statistics, and several other research disciplines. Traditional objectives of graph clustering are to find clusters with…

Machine Learning · Computer Science 2020-11-11 Steinar Laenen , He Sun

In this paper, a new multi-hop weighted clustering procedure is proposed for homogeneous Mobile Ad hoc networks. The algorithm generates double star embedded non-overlapping cluster structures, where each cluster is managed by a leader node…

Discrete Mathematics · Computer Science 2011-05-02 T. N. Janakiraman , A. Senthil Thilak

Mining maximal subgraphs with cohesive structures from a bipartite graph has been widely studied. One important cohesive structure on bipartite graphs is k-biplex, where each vertex on one side disconnects at most k vertices on the other…

Databases · Computer Science 2021-12-30 Kaiqiang Yu , Cheng Long , Shengxin Liu , Da Yan

This paper studies the problem of graph-level clustering, which is a novel yet challenging task. This problem is critical in a variety of real-world applications such as protein clustering and genome analysis in bioinformatics. Recent years…

Machine Learning · Computer Science 2023-03-09 Wei Ju , Yiyang Gu , Binqi Chen , Gongbo Sun , Yifang Qin , Xingyuming Liu , Xiao Luo , Ming Zhang

In this study, we address the complex issue of graph clustering in signed graphs, which are characterized by positive and negative weighted edges representing attraction and repulsion among nodes, respectively. The primary objective is to…

Data Structures and Algorithms · Computer Science 2024-07-10 Felix Hausberger , Marcelo Fonseca Faraj , Christian Schulz

Recently, many carefully crafted graph representation learning methods have achieved impressive performance on either strong heterophilic or homophilic graphs, but not both. Therefore, they are incapable of generalizing well across…

Machine Learning · Computer Science 2023-12-25 Bingheng Li , Erlin Pan , Zhao Kang

Reducing the running time of graph algorithms is vital for tackling real-world problems such as shortest paths and matching in large-scale graphs, where path information plays a crucial role. To address this critical challenge, this paper…

Data Structures and Algorithms · Computer Science 2026-04-14 Akshar Chavan , Sanaz Rabinia , Daniel Grosu , Marco Brocanelli

Spectral clustering has become a popular technique due to its high performance in many contexts. It comprises three main steps: create a similarity graph between N objects to cluster, compute the first k eigenvectors of its Laplacian matrix…

Data Structures and Algorithms · Computer Science 2016-05-24 Nicolas Tremblay , Gilles Puy , Remi Gribonval , Pierre Vandergheynst

Graphs are used to model interactions in a variety of contexts, and there is a growing need to quickly assess the structure of such graphs. Some of the most useful graph metrics are based on triangles, such as those measuring social…

Social and Information Networks · Computer Science 2014-10-21 C. Seshadhri , Ali Pinar , Tamara G. Kolda

We present a $(1+\frac{k}{k+2})$-approximation algorithm for the Maximum $k$-dependent Set problem on bipartite graphs for any $k\ge1$. For a graph with $n$ vertices and $m$ edges, the algorithm runs in $O(k m \sqrt{n})$ time and improves…

Combinatorics · Mathematics 2021-10-07 Seyedmohammadhossein Hosseinian , Sergiy Butenko

In this paper, we present, to our knowledge, the first known I/O efficient solutions for computing the k-bisimulation partition of a massive directed graph, and performing maintenance of such a partition upon updates to the underlying…

Databases · Computer Science 2013-05-03 Yongming Luo , George H. L. Fletcher , Jan Hidders , Yuqing Wu , Paul De Bra