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We introduce a technique to filter out complex data-sets by extracting a subgraph of representative links. Such a filtering can be tuned up to any desired level by controlling the genus of the resulting graph. We show that this technique is…

Disordered Systems and Neural Networks · Physics 2007-05-23 M. Tumminello , T. Aste , T. Di Matteo , R. N. Mantegna

Graph clustering aims to partition nodes into distinct clusters based on their similarity, thereby revealing relationships among nodes. Nevertheless, most existing methods do not fully utilize these edge weights. Leveraging edge weights in…

Machine Learning · Computer Science 2026-02-03 Haobing Liu , Yinuo Zhang , Tingting Wang , Ruobing Jiang , Yanwei Yu

Groups with complex set intersection relations are a natural way to model a wide array of data, from the formation of social groups to the complex protein interactions which form the basis of biological life. One approach to representing…

Machine Learning · Computer Science 2025-01-15 Sepideh Maleki , Josh Vekhter , Keshav Pingali

Graph clustering is an important algorithmic technique for analysing massive graphs, and has been widely applied in many research fields of data science. While the objective of most graph clustering algorithms is to find a vertex set of low…

Data Structures and Algorithms · Computer Science 2025-08-08 Joyentanuj Das , Suranjan De , He Sun

Clustering is a fundamental problem in network analysis that finds closely connected groups of nodes and separates them from other nodes in the graph, while link prediction is to predict whether two nodes in a network are likely to have a…

Social and Information Networks · Computer Science 2022-11-29 Shanfan Zhang , Wenjiao Zhang , Zhan Bu

Correlation clustering provides a method for separating the vertices of a signed graph into the optimum number of clusters without specifying that number in advance. The main goal in this type of clustering is to minimize the number of…

Combinatorics · Mathematics 2025-07-15 Leila Parsaei-Majd

In a standard cluster analysis, such as k-means, in addition to clusters locations and distances between them, it's important to know if they are connected or well separated from each other. The main focus of this paper is discovering the…

Machine Learning · Statistics 2017-05-22 Evgeny Bauman , Konstantin Bauman

Clustering under pairwise constraints is an important knowledge discovery tool that enables the learning of appropriate kernels or distance metrics to improve clustering performance. These pairwise constraints, which come in the form of…

Machine Learning · Computer Science 2022-03-24 Benedikt Boecking , Vincent Jeanselme , Artur Dubrawski

Deep graph clustering, which aims to reveal the underlying graph structure and divide the nodes into different groups, has attracted intensive attention in recent years. However, we observe that, in the process of node encoding, existing…

Machine Learning · Computer Science 2022-01-03 Yue Liu , Wenxuan Tu , Sihang Zhou , Xinwang Liu , Linxuan Song , Xihong Yang , En Zhu

The objective of clustering is to discover natural groups in datasets and to identify geometrical structures which might reside there, without assuming any prior knowledge on the characteristics of the data. The problem can be seen as…

Computational Geometry · Computer Science 2018-01-26 Luis-Evaristo Caraballo , José-Miguel Díaz-Báñez , Nadine Kroher

Current graph clustering methods emphasize individual node and edge con nections, while ignoring higher-order organization at the level of motif. Re cently, higher-order graph clustering approaches have been designed by motif based…

Machine Learning · Computer Science 2024-05-21 Ye Liu , Xuelei Lin , Yejia Chen , Reynold Cheng

Brown clustering is a hard, hierarchical, bottom-up clustering of words in a vocabulary. Words are assigned to clusters based on their usage pattern in a given corpus. The resulting clusters and hierarchical structure can be used in…

Computation and Language · Computer Science 2016-08-05 Manuel R. Ciosici

Analysis of higher-order organizations, usually small connected subgraphs called motifs, is a fundamental task on complex networks. This paper studies a new problem of testing higher-order clusterability: given query access to an undirected…

Data Structures and Algorithms · Computer Science 2023-10-09 Yifei Li , Donghua Yang , Jianzhong Li

We study clustering on graphs with multiple edge types. Our main motivation is that similarities between objects can be measured in many different metrics. For instance similarity between two papers can be based on common authors, where…

Social and Information Networks · Computer Science 2011-09-09 Matthew Rocklin , Ali Pinar

Graph-level clustering remains a pivotal yet formidable challenge in graph learning. Recently, the integration of deep learning with representation learning has demonstrated notable advancements, yielding performance enhancements to a…

Multilayer graphs are commonly used for representing different relations between entities and handling heterogeneous data processing tasks. New challenges arise in multilayer graph clustering for assigning clusters to a common multilayer…

Machine Learning · Computer Science 2018-02-15 Pin-Yu Chen , Alfred O. Hero

Graph filters are a staple tool for processing signals over graphs in a multitude of downstream tasks. However, they are commonly designed for graphs with a fixed number of nodes, despite real-world networks typically grow over time. This…

Machine Learning · Computer Science 2024-09-12 Bishwadeep Das , Elvin Isufi

Multiplex networks are complex graph structures in which a set of entities are connected to each other via multiple types of relations, each relation representing a distinct layer. Such graphs are used to investigate many complex…

Message Passing Neural Networks have recently become the most popular approach to graph machine learning tasks; however, their receptive field is limited by the number of message passing layers. To increase the receptive field, Graph…

Machine Learning · Computer Science 2026-04-10 Oleg Platonov , Liudmila Prokhorenkova

Message Passing Neural Networks (MPNNs) hold a key position in machine learning on graphs, but they struggle with unintended behaviors, such as over-smoothing and over-squashing, due to irregular data structures. The observation and…

Machine Learning · Computer Science 2025-08-26 Junhyun Lee , Veronika Thost , Bumsoo Kim , Jaewoo Kang , Tengfei Ma