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The mechanical properties of collagen fibrils depend on the amount and the distribution of water molecules within the fibrils. Here, we use atomic force microscopy (AFM) to study the effect of hydration on the viscoelastic properties of…

Soft Condensed Matter · Physics 2019-10-03 Manuel R. Uhlig , Robert Magerle

Mineralized collagen microfibrils in human bone provide its mechanical properties (stiffness, elasticity, ductility, energy dissipation and strength). However, detailed 3D finite element models describing the mechanical behaviour of the…

Tissues and Organs · Quantitative Biology 2012-03-01 Ridha Hambli , Abdelwahed Barkaoui

Collagen fibrils are the building block of many biological tissues, which viability depend on the fibrils properties. Altered properties of collagen fibrils are central to the appearance of many diseases, while physiological or native…

Soft Condensed Matter · Physics 2026-05-08 Konstantinos Steiakakis , Alan Pichard , Maxime Vassaux

Biological hydrogels have been increasingly sought after as e.g. wound dressings or scaffolds for regenerative medicine, due to their inherent biofunctionality in biological environments. Especially in moist wound healing, the ideal…

Chemical Physics · Physics 2014-10-24 Giuseppe Tronci , Colin A. Grant , Neil H. Thomson , Stephen J. Russell , David J. Wood

The complexity and heterogeneity of bone tissue require a multiscale modelling to understand its mechanical behaviour and its remodelling mechanisms. In this paper, a novel multiscale hierarchical approach including microfibril scale based…

Medical Physics · Physics 2014-03-13 Abdelwahed Barkaoui , Abdessalem Chamekh , Merzouki Tarek , Ridha Hambli , Mkaddem Ali

Type I collagen is the main component of the extra-cellular matrix (ECM). In vitro, under a narrow window of physico-chemical conditions, type I collagen self-assembles to form complex supramolecular architectures reminiscent of those found…

The predominant structural protein in vertebrates is collagen, which plays a key role in extracellular matrix and connective tissue mechanics. Despite its prevalence and physical importance in biology, the mechanical properties of molecular…

Biological Physics · Physics 2018-11-14 Naghmeh Rezaei , Aaron Lyons , Nancy R. Forde

An accurate description of the structure and dynamics of interfacial water is essential for phospholipid membranes, since it determines their function and their interaction with other molecules. Here we consider water confined in stacked…

Soft Condensed Matter · Physics 2018-11-16 Sotiris Samatas , Carles Calero , Fausto Martelli , Giancarlo Franzese

The aim of this work is to develop a 3D finite elements model to study the nanomechanical behaviour of mineralized collagen microfibrils, which consists of three phases, (i) collagen phase formed by five tropocollagen (TC) molecules linked…

Medical Physics · Physics 2011-12-06 Abdelwahed Barkaoui , Ridha Hambli

Collagen is a key structural protein in the human body, which undergoes mineralization during the formation of hard tissues. Earlier studies have described the mechanical behavior of bone at different scales highlighting material features…

Applied Physics · Physics 2021-07-02 Mario Milazzo , Gang Seob Jung , Serena Danti , Markus J. Buehler

Large scale molecular dynamics simulations are used to investigate the structural and dynamical modifications of supercooled water when confined inside an hydrophilic nanopore. We then investigate the evolution of the auto-organization of…

Disordered Systems and Neural Networks · Physics 2015-06-25 Victor Teboul

Collagenolytic degradation is a process fundamental to tissue remodeling. The microarchitecture of collagen fibril networks changes during development, aging, and disease. Such changes to microarchitecture are often accompanied by changes…

Biological Physics · Physics 2024-08-13 B. Debnath , B. N. Narasimhan , S. I. Fraley , P. Rangamani

Collagen is the most abundant structural protein in animals, forming hierarchically organised fibrils that provide mechanical support to tissues. Despite detailed structural studies, the physical principles that govern the formation of the…

Soft Condensed Matter · Physics 2025-05-01 Art'om Zolotarjov , Roland Kröger , Dmitri O. Pushkin

Collagen fibrils are versatile self-assembled structures that provide mechanical integrity within mammalian tissues. The radius of collagen fibrils vary widely depending on experimental conditions \textit{in vitro} or anatomical location…

Soft Condensed Matter · Physics 2018-02-26 Samuel Cameron , Laurent Kreplak , Andrew D. Rutenberg

Bone is mineralized tissue constituting the skeletal system, supporting and protecting body organs and tissues. At the molecular level, mineralized collagen fibril is the basic building block of bone tissue, and hence, understanding bone…

Atomic and Molecular Clusters · Physics 2021-06-16 Mario Milazzo , Alessio David , Gang Seob Jung , Serena Danti , Markus J. Buehler

In order to establish defined biomimetic systems, type I collagen was functionalised with 1,3-Phenylenediacetic acid (Ph) as aromatic, bifunctional segment. Following investigation on molecular organization and macroscopic properties,…

Biological Physics · Physics 2013-02-11 Giuseppe Tronci , Amanda Doyle , Stephen J. Russell , David J. Wood

The adsorption of a collagen fragment on both a hydrophobic, hydrogen-terminated and a hydrophilic, natively oxidised Si surface is investigated using all-atom molecular dynamics. While favourable direct protein-surface interactions via…

Soft Condensed Matter · Physics 2019-03-27 Daniel J. Cole , Mike C. Payne , Lucio Colombi Ciacchi

Collagen fibrils, cable-like assemblies of long biological molecules, are dominant components of connective tissues. Their determinant morphological and functional roles motivated a large number of studies concerning their formation and…

Soft Condensed Matter · Physics 2011-04-04 Jean Charvolin , Jean-François Sadoc

Chemical crosslinking of collagen is a general strategy to reproduce macroscale tissue properties in physiological environment. However, simultaneous control of protein conformation, material properties and biofunctionality is highly…

Chemical Physics · Physics 2013-08-27 Giuseppe Tronci , Amanda Doyle , Stephen J. Russell , David J. Wood

A large number of water models exists for molecular simulations. They differ in the ability to reproduce specific features of real water instead of others, like the correct temperature for the density maximum or the diffusion coefficient.…

Soft Condensed Matter · Physics 2012-06-04 Roman Shevchuk , Diego Prada-Gracia , Francesco Rao
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