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This chapter investigates the evolutionary ecology of software, focusing on the symbiotic relationship between software and innovation. An interplay between constraints, tinkering, and frequency-dependent selection drives the complex…

Software Engineering · Computer Science 2025-12-03 Sergi Valverde , Blai Vidiella , Salva Duran-Nebreda

Scientists across disciplines write code for critical activities like data collection and generation, statistical modeling, and visualization. As large language models that can generate code have become widely available, scientists may…

Software Engineering · Computer Science 2025-02-25 Gabrielle O'Brien

Large language models (LLMs) have demonstrated notable proficiency in code generation, with numerous prior studies showing their promising capabilities in various development scenarios. However, these studies mainly provide evaluations in…

Software Engineering · Computer Science 2024-03-19 Kailun Jin , Chung-Yu Wang , Hung Viet Pham , Hadi Hemmati

In this paper, we introduce a sociolinguistic perspective on language modeling. We claim that large language models are inherently models of varieties of language, and we consider how this insight can inform the development and deployment…

Large Language Models (LLMs) exhibit world knowledge and inference capabilities, making them powerful tools for various applications. This paper proposes a feedback loop mechanism that leverages these capabilities to tune Evolution…

Machine Learning · Computer Science 2024-05-21 Oliver Kramer

A significant amount of research is focused on developing and evaluating large language models for a variety of code synthesis tasks. These include synthesizing code from natural language, synthesizing tests from code, and synthesizing…

Data scientists often develop machine learning models to solve a variety of problems in the industry and academy but not without facing several challenges in terms of Model Development. The problems regarding Machine Learning Development…

Software Engineering · Computer Science 2021-02-16 Giuliano Lorenzoni , Paulo Alencar , Nathalia Nascimento , Donald Cowan

Language models serve as a cornerstone in natural language processing (NLP), utilizing mathematical methods to generalize language laws and knowledge for prediction and generation. Over extensive research spanning decades, language modeling…

Computation and Language · Computer Science 2024-09-24 Zichong Wang , Zhibo Chu , Thang Viet Doan , Shiwen Ni , Min Yang , Wenbin Zhang

Large Language Models (LLMs) have emerged as coding assistants, capable of generating source code from natural language prompts. With the increasing adoption of LLMs in software development, academic research and industry based projects are…

Software languages evolve over time for reasons such as feature additions. When grammars evolve, textual instances that originally conformed to them may become outdated. While model-driven engineering provides many techniques for…

Software Engineering · Computer Science 2026-02-13 Weixing Zhang , Bowen Jiang , Yuhong Fu , Anne Koziolek , Regina Hebig , Daniel Strüber

Programming languages are emerging as a challenging and interesting domain for machine learning. A core task, which has received significant attention in recent years, is building generative models of source code. However, to our knowledge,…

Machine Learning · Computer Science 2019-04-08 Rui Zhao , David Bieber , Kevin Swersky , Daniel Tarlow

Software Engineering (SE) is the systematic design, development, maintenance, and management of software applications underpinning the digital infrastructure of our modern world. Very recently, the SE community has seen a rapidly increasing…

Software Engineering · Computer Science 2024-09-10 Quanjun Zhang , Chunrong Fang , Yang Xie , Yaxin Zhang , Yun Yang , Weisong Sun , Shengcheng Yu , Zhenyu Chen

This paper considers how a formal mathematically-based model can be used in support of evolutionary software development, and in particular how such a model can be kept consistent with the implementation as it changes to meet new…

Software Engineering · Computer Science 2011-11-14 A. Gravell , Y. Howard , J. C. Augusto , C. Ferreira , S. Gruner

Question answering over source code provides software engineers and project managers with helpful information about the implemented features of a software product. This paper presents a work devoted to using large language models for…

Computation and Language · Computer Science 2024-11-06 Georgy Andryushchenko , Vladimir Ivanov , Vladimir Makharev , Elizaveta Tukhtina , Aidar Valeev

The success of language models, especially transformer-based architectures, has trickled into other domains giving rise to "scientific language models" that operate on small molecules, proteins or polymers. In chemistry, language models…

Chemical Physics · Physics 2024-10-22 Nikita Janakarajan , Tim Erdmann , Sarath Swaminathan , Teodoro Laino , Jannis Born

Large language models (LLMs) have shown significant potential to change how we write, communicate, and create, leading to rapid adoption across society. This dissertation examines how individuals and institutions are adapting to and…

Computation and Language · Computer Science 2025-06-24 Weixin Liang

The rapid development of Large Language Models (LLMs) demonstrates remarkable multilingual capabilities in natural language processing, attracting global attention in both academia and industry. To mitigate potential discrimination and…

Computation and Language · Computer Science 2025-01-08 Kaiyu Huang , Fengran Mo , Xinyu Zhang , Hongliang Li , You Li , Yuanchi Zhang , Weijian Yi , Yulong Mao , Jinchen Liu , Yuzhuang Xu , Jinan Xu , Jian-Yun Nie , Yang Liu

We consider the protein sequence engineering problem, which aims to find protein sequences with high fitness levels, starting from a given wild-type sequence. Directed evolution has been a dominating paradigm in this field which has an…

Machine Learning · Computer Science 2025-01-20 Yinkai Wang , Jiaxing He , Yuanqi Du , Xiaohui Chen , Jianan Canal Li , Li-Ping Liu , Xiaolin Xu , Soha Hassoun

While large language models (LLMs) have demonstrated strong capability in structured prediction tasks such as semantic parsing, few amounts of research have explored the underlying mechanisms of their success. Our work studies different…

Computation and Language · Computer Science 2023-02-01 Daking Rai , Yilun Zhou , Bailin Wang , Ziyu Yao

Large models, encompassing large language and diffusion models, have shown exceptional promise in approximating human-level intelligence, garnering significant interest from both academic and industrial spheres. However, the training of…

Machine Learning · Computer Science 2024-03-05 Yue Zhou , Chenlu Guo , Xu Wang , Yi Chang , Yuan Wu
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