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Given a set of $k$ strings $I$, their longest common subsequence (LCS) is the string with the maximum length that is a subset of all the strings in $I$. A data-structure for this problem preprocesses $I$ into a data-structure such that the…

Data Structures and Algorithms · Computer Science 2021-01-13 Sepideh Aghamolaei

We revisit classic string problems considered in the area of parameterized complexity, and study them through the lens of dynamic data structures. That is, instead of asking for a static algorithm that solves the given instance efficiently,…

Data Structures and Algorithms · Computer Science 2022-05-03 Jędrzej Olkowski , Michał Pilipczuk , Mateusz Rychlicki , Karol Węgrzycki , Anna Zych-Pawlewicz

We study the problem of solving semidefinite programs (SDP) in the streaming model. Specifically, $m$ constraint matrices and a target matrix $C$, all of size $n\times n$ together with a vector $b\in \mathbb{R}^m$ are streamed to us…

Data Structures and Algorithms · Computer Science 2023-09-12 Zhao Song , Mingquan Ye , Lichen Zhang

Let $\D = $$ \{d_1,d_2,...d_D\}$ be a given set of $D$ string documents of total length $n$, our task is to index $\D$, such that the $k$ most relevant documents for an online query pattern $P$ of length $p$ can be retrieved efficiently. We…

Data Structures and Algorithms · Computer Science 2012-04-03 Wing-Kai Hon , Rahul Shah , Sharma V. Thankachan

In this paper, we study the static cell probe complexity of non-adaptive data structures that maintain a subset of $n$ points from a universe consisting of $m=n^{1+\Omega(1)}$ points. A data structure is defined to be non-adaptive when the…

Data Structures and Algorithms · Computer Science 2024-04-19 Giuseppe Persiano , Kevin Yeo

We consider string matching with variable length gaps. Given a string $T$ and a pattern $P$ consisting of strings separated by variable length gaps (arbitrary strings of length in a specified range), the problem is to find all ending…

Data Structures and Algorithms · Computer Science 2011-10-14 Philip Bille , Inge Li Goertz , Hjalte Wedel Vildhøj , David Kofoed Wind

In spoken Keyword Search, the query may contain out-of-vocabulary (OOV) words not observed when training the speech recognition system. Using subword language models (LMs) in the first-pass recognition makes it possible to recognize the OOV…

Computation and Language · Computer Science 2020-09-11 Mittul Singh , Sami Virpioja , Peter Smit , Mikko Kurimo

We study fully dynamic algorithms for maximum matching. This is a well-studied problem, known to admit several update-time/approximation trade-offs. For instance, it is known how to maintain a 1/2-approximate matching in $\log^{O(1)} n$…

Data Structures and Algorithms · Computer Science 2022-11-15 Soheil Behnezhad

Given a set of $n$ input integers, the Equal Subset Sum problem asks us to find two distinct subsets with the same sum. In this paper we present an algorithm that runs in time $O^*(3^{0.387n})$ in the~average case, significantly improving…

Computational Complexity · Computer Science 2021-10-28 Xi Chen , Yaonan Jin , Tim Randolph , Rocco A. Servedio

Text indexing is a fundamental and well-studied problem. Classic solutions either replace the original text with a compressed representation, e.g., the FM-index and its variants, or keep it uncompressed but attach some redundancy - an index…

Data Structures and Algorithms · Computer Science 2026-02-05 Lorraine A. K. Ayad , Gabriele Fici , Ragnar Groot Koerkamp , Grigorios Loukides , Rob Patro , Giulio Ermanno Pibiri , Solon P. Pissis

Given a pattern x of length m and a text y of length n, both over an ordered alphabet, the order-preserving pattern matching problem consists in finding all substrings of the text with the same relative order as the pattern. It is an…

Data Structures and Algorithms · Computer Science 2015-01-19 Simone Faro , Oğuzhan Külekci

Time series are ubiquitous in domains ranging from medicine to marketing and finance. Frequent Pattern Mining (FPM) from a time series has thus received much attention. Recently, it has been studied under the order-preserving (OP) matching…

Data Structures and Algorithms · Computer Science 2024-12-02 Ling Li , Wiktor Zuba , Grigorios Loukides , Solon P. Pissis , Maria Matsangidou

We provide new high-accuracy randomized algorithms for solving linear systems and regression problems that are well-conditioned except for $k$ large singular values. For solving such $d \times d$ positive definite system our algorithms…

Data Structures and Algorithms · Computer Science 2025-07-17 Michał Dereziński , Aaron Sidford

In the semi-streaming model for processing massive graphs, an algorithm makes multiple passes over the edges of a given $n$-vertex graph and is tasked with computing the solution to a problem using $O(n \cdot \text{polylog}(n))$ space.…

Data Structures and Algorithms · Computer Science 2023-12-21 Sepehr Assadi , Christian Konrad , Kheeran K. Naidu , Janani Sundaresan

Given a pattern of length $m$ and a text of length $n$, the goal in $k$-mismatch pattern matching is to compute, for every $m$-substring of the text, the exact Hamming distance to the pattern or report that it exceeds $k$. This can be…

Data Structures and Algorithms · Computer Science 2017-04-06 Paweł Gawrychowski , Przemysław Uznański

A Random Access query to a string $T\in [0..\sigma)^n$ asks for the character $T[i]$ at a given position $i\in [0..n)$. In $O(n\log\sigma)$ bits of space, this fundamental task admits constant-time queries. While this is optimal in the…

Data Structures and Algorithms · Computer Science 2026-05-13 Anouk Duyster , Tomasz Kociumaka

Given an LZW/LZ78 compressed text, we want to find an approximate occurrence of a given pattern of length m. The goal is to achieve time complexity depending on the size n of the compressed representation of the text instead of its length.…

Data Structures and Algorithms · Computer Science 2013-09-23 Pawel Gawrychowski , Damian Straszak

Maximum bipartite matching (MBM) is a fundamental problem in combinatorial optimization with a long and rich history. A classic result of Hopcroft and Karp (1973) provides an $O(m \sqrt{n})$-time algorithm for the problem, where $n$ and $m$…

Data Structures and Algorithms · Computer Science 2024-06-03 Julia Chuzhoy , Sanjeev Khanna

We generalize Karp-Rabin string matching to handle multiple patterns in $\mathcal{O}(n \log n + m)$ time and $\mathcal{O}(s)$ space, where $n$ is the length of the text and $m$ is the total length of the $s$ patterns, returning correct…

Data Structures and Algorithms · Computer Science 2015-09-11 Johannes Fischer , Travis Gagie , Paweł Gawrychowski , Tomasz Kociumaka

We consider the problem of finding, given two documents of total length $n$, a longest string occurring as a substring of both documents. This problem, known as the Longest Common Substring (LCS) problem, has a classic $O(n)$-time solution…

Data Structures and Algorithms · Computer Science 2020-04-29 Stav Ben-Nun , Shay Golan , Tomasz Kociumaka , Matan Kraus