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It has long been believed that swimming eukaryotes feel solid boundaries through direct ciliary contact. Specifically, based on observations of behavior of green alga Chlamydomonas reinhardtii it has been reported that it is their "flagella…

Fluid Dynamics · Physics 2018-07-18 Mehdi Mirzakhanloo , Mohammad-Reza Alam

Single eukaryotic cells commonly sense and follow chemical gradients, performing chemotaxis. Recent experiments and theories, however, show that even when single cells do not chemotax, clusters of cells may, if their interactions are…

Cell Behavior · Quantitative Biology 2016-07-04 Brian A. Camley , Juliane Zimmermann , Herbert Levine , Wouter-Jan Rappel

Brain oscillations are believed to be involved in the different operations necessary to manipulate information during working memory tasks. We propose a modular variant of the Lisman-Idiart model for short-term memory, where theta, alpha…

Neurons and Cognition · Quantitative Biology 2021-03-30 Gustavo Soroka , Marco Idiart

The transfer of mechanical signals through cells is a complex phenomenon. To uncover a new mechanotransduction pathway, we study the frequency-dependent transport of mechanical stimuli by single microtubules and small networks in a…

Biological Physics · Physics 2017-05-03 M. D. Koch , N. Schneider , P. Nick , A. Rohrbach

We present models of dormancy in a planktonic culture and in biofilm, and examine the relative advantage of short dormancy versus long dormancy times in each case. Simulations and analyses indicate that in planktonic batch cultures and in…

Cell Behavior · Quantitative Biology 2023-02-14 Bruce P. Ayati , Isaac Klapper

The optical memory effect is a well-known type of wave correlation that is observed in coherent fields that scatter through thin and diffusive materials, like biological tissue. It is a fundamental physical property of scattering media that…

In this Letter, we investigate the effects of a time-dependent, short-ranged interaction on the long-time expansion dynamics of Fermi gases. We show that the effects of the interaction on the dynamics is dictated by how it changes under a…

Quantum Gases · Physics 2022-02-02 Jeff Maki , Shizhong Zhang , Fei Zhou

Biological cells are often found to sense their chemical environment near the single-molecule detection limit. Surprisingly, this precision is higher than simple estimates of the fundamental physical limit, hinting towards active sensing…

Biological Physics · Physics 2015-11-06 Gerardo Aquino , Luke Tweedy , Doris Heinrich , Robert G. Endres

Inspired by biology's use of vesicles for targeted transport, many studies have propelled liposomes with active matter, creating synthetic systems that can be viewed as microscale biohybrid robots. Nevertheless, the underlying motility…

Magnetotaxis is a well known phenomenon in swimming microorganisms which sense magnetic fields e.g. by incorporating crystalline magnetosomes. In designing artificial active matter with tunable dynamics, external magnetic fields can provide…

Microorganisms swimming through viscous fluids imprint their propulsion mechanisms in the flow fields they generate. Extreme confinement of these swimmers between rigid boundaries often arises in natural and technological contexts, yet…

Soft Condensed Matter · Physics 2022-01-26 Debasmita Mondal , Ameya G. Prabhune , Sriram Ramaswamy , Prerna Sharma

Memory effects during metal-insulator transitions in quantum materials reveal complex physics and potential for novel electronics mimicking biological neural systems. Nonetheless, understanding of memory and nonlinearity in sequential…

We present experimental results demonstrating that, relative to continuous illumination, an increase of a factor of 3-10 in the photon efficiency of algal photo-synthesis is attainable via the judicious application of pulsed light for light…

The primary objective of this article is to explore how rotation influences the initiation of phototactic bioconvection. This investigation is conducted through the application of linear stability theory to a suspension composed of…

Soft Condensed Matter · Physics 2023-09-21 S. K. Rajput

Locomotion and transport of microorganisms in fluids is an essential aspect of life. Search for food, orientation toward light, spreading of off-spring, and the formation of colonies are only possible due to locomotion. Swimming at the…

Biological Physics · Physics 2015-05-26 Jens Elgeti , Roland G. Winkler , Gerhard Gompper

Thanks to recent technological advances, it is now possible to track with an unprecedented precision and for long periods of time the movement patterns of many living organisms in their habitat. The increasing amount of data available on…

Populations and Evolution · Quantitative Biology 2015-05-19 Denis Boyer , Peter D. Walsh

Understanding principles of neurolocomotion requires the synthesis of neural activity, sensory feedback, and biomechanics. The nematode \textit{C. elegans} is an ideal model organism for studying locomotion in an integrated neuromechanical…

Neurons and Cognition · Quantitative Biology 2021-06-08 Carter L. Johnson , Timothy J. Lewis , Robert D. Guy

Many diffusion processes in nature and society were found to be anomalous, in the sense of being fundamentally different from conventional Brownian motion. An important example is the migration of biological cells, which exhibits…

Statistical Mechanics · Physics 2018-02-13 J. M. Nava-Sedeno , H. Hatzikirou , R. Klages , A. Deutsch

Aerotaxis is the ability of motile cells to navigate toward oxygen. A key question is the dependence of the aerotactic velocity with the local oxygen concentration c. Here we combine simultaneous bacteria tracking and local oxygen…

Biological Physics · Physics 2022-09-16 J. Bouvard , C. Douarche , P. Mergaert , H. Auradou , F. Moisy

The potential of industrial applications for microalgae has motivated their recent fast development. Their growth dynamics depends on different factors that must be optimized. Since they get their energy from photosynthesis, light is a key…

Numerical Analysis · Mathematics 2021-08-24 Olivier Bernard , Liu-Di Lu