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Graphs are a natural representation for systems based on relations between connected entities. Combinatorial optimization problems, which arise when considering an objective function related to a process of interest on discrete structures,…

Machine Learning · Computer Science 2024-08-21 Victor-Alexandru Darvariu , Stephen Hailes , Mirco Musolesi

Being cognizant of the abundance of multi-body interactions in various complex systems, here we investigate a possible way to incorporate multi-body interactions in dynamical networks. Adopting hypergraph as the underlying architecture aids…

Dynamical Systems · Mathematics 2023-03-24 Anirban Banerjee , Samiron Parui

Knowledge graphs have emerged as fundamental structures for representing complex relational data across scientific and enterprise domains. However, existing embedding methods face critical limitations when modeling diverse relationship…

Artificial Intelligence · Computer Science 2025-11-17 Jugal Gajjar , Kaustik Ranaware , Kamalasankari Subramaniakuppusamy , Vaibhav Gandhi

Simplicial complexes are a popular tool used to model higher-order interactions between elements of complex social and biological systems. In this paper, we study some combinatorial aspects of a class of simplicial complexes created by a…

Combinatorics · Mathematics 2023-05-17 Zixuan Xie , Yucheng Wang , Wanyue Xu , Liwang Zhu , Wei Li , Zhongzhi Zhang

We develop novel hierarchical reciprocal graphical models to infer gene networks from heterogeneous data. In the case of data that can be naturally divided into known groups, we propose to connect graphs by introducing a hierarchical prior…

Methodology · Statistics 2018-01-23 Yang Ni , Peter Mueller , Yitan Zhu , Yuan Ji

The aim of this paper is to generalize the notion of the coloring complex of a graph to hypergraphs. We present three different interpretations of those complexes -- a purely combinatorial one and two geometric ones. It is shown, that most…

Combinatorics · Mathematics 2012-05-01 Felix Breuer , Aaron Dall , Martina Kubitzke

In recent years, the Graph Model has become increasingly popular, especially in the application domain of social networks. The model has been semantically augmented with properties and labels attached to the graph elements. It is difficult…

Databases · Computer Science 2021-10-05 Fritz Laux

Hypergraphs require higher-dimensional representations, which makes it more difficult to compute and interpret their spectral properties. This survey article uses the framework of hypermatrices to give an in-depth overview of the spectral…

History and Overview · Mathematics 2025-07-21 Shashwath S Shetty , K Arathi Bhat

A heterogeneous graph consists of different vertices and edges types. Learning on heterogeneous graphs typically employs meta-paths to deal with the heterogeneity by reducing the graph to a homogeneous network, guide random walks or capture…

Machine Learning · Statistics 2023-03-06 See Hian Lee , Feng Ji , Wee Peng Tay

In applications such as social, energy, transportation, sensor, and neuronal networks, high-dimensional data naturally reside on the vertices of weighted graphs. The emerging field of signal processing on graphs merges algebraic and…

Discrete Mathematics · Computer Science 2015-06-12 David I Shuman , Sunil K. Narang , Pascal Frossard , Antonio Ortega , Pierre Vandergheynst

The heterogeneity of breast cancer presents considerable challenges for its early detection, prognosis, and treatment selection. Convolutional neural networks often neglect the spatial relationships within histopathological images, which…

Computer Vision and Pattern Recognition · Computer Science 2023-07-18 Akhila Krishna K , Ravi Kant Gupta , Nikhil Cherian Kurian , Pranav Jeevan , Amit Sethi

We give an overview of combinatorial methods to represent 3D data, such as graphs and meshes, from the viewpoint of their amenability to analysis using machine learning algorithms. We highlight pros and cons of various representations and…

Machine Learning · Computer Science 2024-08-19 Tomasz Prytuła

Various simplicial complexes can be associated with a graph. Box complexes form an important families of such simplicial complexes and are especially useful for providing lower bounds on the chromatic number of the graph via some of their…

Combinatorics · Mathematics 2024-01-05 Hamid Reza Daneshpajouh , Frédéric Meunier

Topological Deep Learning seeks to enhance the predictive performance of neural network models by harnessing topological structures in input data. Topological neural networks operate on spaces such as cell complexes and hypergraphs, that…

Hypergraphs offer a generalized framework for understanding complex systems, covering group interactions of different orders beyond traditional pairwise interactions. This modelling allows for the simplified description of simultaneous…

Optics · Physics 2025-07-22 Kunwoo Park , Ikbeom Lee , Seungmok Youn , Gitae Lee , Namkyoo Park , Sunkyu Yu

The processing of signals supported on non-Euclidean domains has attracted large interest recently. Thus far, such non-Euclidean domains have been abstracted primarily as graphs with signals supported on the nodes, though the processing of…

Machine Learning · Computer Science 2022-07-28 T. Mitchell Roddenberry , Michael T. Schaub , Mustafa Hajij

Molecular graphs generally contain subgraphs (known as groups) that are identifiable and significant in composition, functionality, geometry, etc. Flat latent representations (node embeddings or graph embeddings) fail to represent, and…

Machine Learning · Computer Science 2019-04-05 Daniel T. Chang

Graph embedding techniques are useful to characterize spectral signature relations for hyperspectral images. However, such images consists of disjoint classes due to spatial details that are often ignored by existing graph computing tools.…

Computer Vision and Pattern Recognition · Computer Science 2012-11-29 Dalton Lunga 'and' Okan Ersoy

Graphs are commonly used in mathematics to represent some relationships between items. However, as simple objects, they sometimes fail to capture all relevant aspects of real-world data. To address this problem, we generalize them and model…

Social and Information Networks · Computer Science 2019-10-04 Pimprenelle Parmentier , Tiphaine Viard , Benjamin Renoust , Jean-François Baffier

Graphs are widely used to encapsulate a variety of data formats, but real-world networks often involve complex node relations beyond only being pairwise. While hypergraphs and hierarchical graphs have been developed and employed to account…

Machine Learning · Computer Science 2024-02-21 Zehui Li , Xiangyu Zhao , Mingzhu Shen , Guy-Bart Stan , Pietro Liò , Yiren Zhao