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A large number of real-world graphs or networks are inherently heterogeneous, involving a diversity of node types and relation types. Heterogeneous graph embedding is to embed rich structural and semantic information of a heterogeneous…

Social and Information Networks · Computer Science 2020-04-01 Xinyu Fu , Jiani Zhang , Ziqiao Meng , Irwin King

Cardiac Cine Magnetic Resonance Imaging (MRI) provides an accurate assessment of heart morphology and function in clinical practice. However, MRI requires long acquisition times, with recent deep learning-based methods showing great promise…

Image and Video Processing · Electrical Eng. & Systems 2024-07-04 Siying Xu , Kerstin Hammernik , Andreas Lingg , Jens Kuebler , Patrick Krumm , Daniel Rueckert , Sergios Gatidis , Thomas Kuestner

Drug-target relationships may now be predicted computationally using bioinformatics data, which is a valuable tool for understanding pharmacological effects, enhancing drug development efficiency, and advancing related research. A number of…

Machine Learning · Computer Science 2024-07-16 Yuhuan Zhou , Yulin Wu , Weiwei Yuan , Xuan Wang , Junyi Li

Modern neuroimaging techniques, such as diffusion tensor imaging (DTI) and functional magnetic resonance imaging (fMRI), enable us to model the human brain as a brain network or connectome. Capturing brain networks' structural information…

Graph Neural Networks have recently become a prevailing paradigm for various high-impact graph analytical problems. Existing efforts can be mainly categorized as spectral-based and spatial-based methods. The major challenge for the former…

Machine Learning · Computer Science 2022-02-22 Yushun Dong , Kaize Ding , Brian Jalaian , Shuiwang Ji , Jundong Li

As one of the important tools for spatial feature extraction, graph convolution has been applied in a wide range of fields such as traffic flow prediction. However, current popular works of graph convolution cannot guarantee spatio-temporal…

Machine Learning · Computer Science 2023-09-15 Tianpu Zhang , Weilong Ding , Mengda Xing

Artificial intelligence (AI) is increasingly used in every stage of drug development. Continuing breakthroughs in AI-based methods for drug discovery require the creation, improvement, and refinement of drug discovery data. We posit a new…

Machine Learning · Computer Science 2024-05-08 Bing Hu , Ashish Saragadam , Anita Layton , Helen Chen

Graph-based neural network models are gaining traction in the field of representation learning due to their ability to uncover latent topological relationships between entities that are otherwise challenging to identify. These models have…

Image and Video Processing · Electrical Eng. & Systems 2023-07-25 Aryan Singh , Pepijn Van de Ven , Ciarán Eising , Patrick Denny

Graph Neural Networks (GNNs) have achieved promising performance in a variety of graph-focused tasks. Despite their success, however, existing GNNs suffer from two significant limitations: a lack of interpretability in their results due to…

Machine Learning · Statistics 2024-11-19 Wenzhuo Zhou , Annie Qu , Keiland W. Cooper , Norbert Fortin , Babak Shahbaba

Neural networks excel in detecting regular patterns but are less successful in representing and manipulating complex data structures, possibly due to the lack of an external memory. This has led to the recent development of a new line of…

Artificial Intelligence · Computer Science 2018-11-29 Trang Pham , Truyen Tran , Svetha Venkatesh

Deep convolutional neural networks (CNNs) have brought breakthroughs in processing clinical electrocardiograms (ECGs), speaker-independent speech and complex images. However, typical CNNs require a fixed input size while it is common to…

Machine Learning · Computer Science 2022-10-07 Linpeng Jin

Graph neural networks (GNNs) have demonstrated great success in representation learning for graph-structured data. The layer-wise graph convolution in GNNs is shown to be powerful at capturing graph topology. During this process, GNNs are…

Machine Learning · Computer Science 2021-12-10 Mingxuan Ju , Shifu Hou , Yujie Fan , Jianan Zhao , Liang Zhao , Yanfang Ye

Background and Aim: Accurate classification of Magnetic Resonance Images (MRI) is essential to accurately predict Mild Cognitive Impairment (MCI) to Alzheimer's Disease (AD) conversion. Meanwhile, deep learning has been successfully…

Computer Vision and Pattern Recognition · Computer Science 2021-09-03 Kshitiz Shrestha , Omar Hisham Alsadoon , Abeer Alsadoon , Tarik A. Rashid , Rasha S. Ali , P. W. C. Prasad , Oday D. Jerew

Fingerprint-based indoor localization is often labor-intensive due to the need for dense grids and repeated measurements across time and space. Maintaining high localization accuracy with extremely sparse fingerprints remains a persistent…

Machine Learning · Computer Science 2025-04-08 Wenzhong Yan , Feng Yin , Jun Gao , Ao Wang , Yang Tian , Ruizhi Chen

We propose a lesion-aware graph neural network (LEGNet) to predict language ability from resting-state fMRI (rs-fMRI) connectivity in patients with post-stroke aphasia. Our model integrates three components: an edge-based learning module…

Machine Learning · Computer Science 2024-09-05 Zijian Chen , Maria Varkanitsa , Prakash Ishwar , Janusz Konrad , Margrit Betke , Swathi Kiran , Archana Venkataraman

EEG-based recognition of activities and states involves the use of prior neuroscience knowledge to generate quantitative EEG features, which may limit BCI performance. Although neural network-based methods can effectively extract features,…

Machine Learning · Computer Science 2023-03-30 Zhengqing Miao , Xin Zhang , Meirong Zhao , Dong Ming

Transformers have set new benchmarks in audio processing tasks, leveraging self-attention mechanisms to capture complex patterns and dependencies within audio data. However, their focus on pairwise interactions limits their ability to…

Sound · Computer Science 2025-01-30 Shubhr Singh , Emmanouil Benetos , Huy Phan , Dan Stowell

In the last decade, computer-aided early diagnostics of Alzheimer's Disease (AD) and its prodromal form, Mild Cognitive Impairment (MCI), has been the subject of extensive research. Some recent studies have shown promising results in the AD…

Computer Vision and Pattern Recognition · Computer Science 2018-09-12 Alexander Khvostikov , Karim Aderghal , Andrey Krylov , Gwenaelle Catheline , Jenny Benois-Pineau

Deep neural networks (DNNs) typically employ an end-to-end (E2E) training paradigm which presents several challenges, including high GPU memory consumption, inefficiency, and difficulties in model parallelization during training. Recent…

Computer Vision and Pattern Recognition · Computer Science 2024-12-23 Yuming Zhang , Shouxin Zhang , Peizhe Wang , Feiyu Zhu , Dongzhi Guan , Junhao Su , Jiabin Liu , Changpeng Cai

Machine-assisted treatment recommendations hold a promise to reduce physician time and decision errors. We formulate the task as a sequence-to-sequence prediction model that takes the entire time-ordered medical history as input, and…

Machine Learning · Computer Science 2018-02-13 Hung Le , Truyen Tran , Svetha Venkatesh