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Large Language Models (LLMs) are a powerful tool for statistical text analysis, with derived sequences of next-token probability distributions offering a wealth of information. Extracting this signal typically relies on metrics such as…

We discuss species distribution models (SDM) for biodiversity studies in ecology. SDM plays an important role to estimate abundance of a species based on environmental variables that are closely related with the habitat of the species. The…

Applications · Statistics 2023-05-01 Osamu Komori , Yusuke Saigusa , Shinto Eguchi

Joint species distribution models (JSDM) are among the most important statistical tools in community ecology. They are routinely used for inference and various prediction tasks, such as to build species distribution maps or biomass…

Scientific names of organisms consist of a genus name and a species epithet, with the latter often reflecting aspects such as morphology, ecology, distribution, and cultural background. Traditionally, researchers have manually labeled…

Computation and Language · Computer Science 2026-01-13 Keito Inoshita , Kota Nojiri , Haruto Sugeno , Takumi Taga

Species distribution models (SDMs), which aim to predict species occurrence based on environmental variables, are widely used to monitor and respond to biodiversity change. Recent deep learning advances for SDMs have been shown to perform…

Machine Learning · Computer Science 2025-11-14 Catherine Villeneuve , Benjamin Akera , Mélisande Teng , David Rolnick

The difficulty to measure or predict species community composition at fine spatio-temporal resolution and over large spatial scales severely hampers our ability to understand species assemblages and take appropriate conservation measures.…

1. Joint Species Distribution models (JSDMs) explain spatial variation in community composition by contributions of the environment, biotic associations, and possibly spatially structured residual covariance. They show great promise as a…

Quantitative Methods · Quantitative Biology 2023-03-28 Maximilian Pichler , Florian Hartig

Species distribution modeling is a highly versatile tool for understanding the intricate relationship between environmental conditions and species occurrences. However, the available data often lacks information on confirmed species absence…

Quantitative Methods · Quantitative Biology 2024-06-18 Robin Zbinden , Nina van Tiel , Benjamin Kellenberger , Lloyd Hughes , Devis Tuia

Large language models (LLMs) have been effectively used for many computer vision tasks, including image classification. In this paper, we present a simple yet effective approach for zero-shot image classification using multimodal LLMs.…

Computer Vision and Pattern Recognition · Computer Science 2025-06-27 Abdelrahman Abdelhamed , Mahmoud Afifi , Alec Go

Out-of-distribution (OOD) detection has seen significant advancements with zero-shot approaches by leveraging the powerful Vision-Language Models (VLMs) such as CLIP. However, prior research works have predominantly focused on enhancing…

Computer Vision and Pattern Recognition · Computer Science 2025-01-10 Pei-Kang Lee , Jun-Cheng Chen , Ja-Ling Wu

Recent advancements in open vocabulary models, like CLIP, have notably advanced zero-shot classification and segmentation by utilizing natural language for class-specific embeddings. However, most research has focused on improving model…

Computer Vision and Pattern Recognition · Computer Science 2024-04-02 Wenfang Sun , Yingjun Du , Gaowen Liu , Ramana Kompella , Cees G. M. Snoek

Species distribution models (SDMs) are widely used to predict species' geographic distributions, serving as critical tools for ecological research and conservation planning. Typically, SDMs relate species occurrences to environmental…

Machine Learning · Computer Science 2025-08-12 Hager Radi Abdelwahed , Mélisande Teng , Robin Zbinden , Laura Pollock , Hugo Larochelle , Devis Tuia , David Rolnick

Millions of biological sample records collected in the last few centuries archived in natural history collections are un-georeferenced. Georeferencing complex locality descriptions associated with these collection samples is a highly…

Artificial Intelligence · Computer Science 2025-07-14 Kalana Wijegunarathna , Kristin Stock , Christopher B. Jones

Detecting anomalies or out-of-distribution (OOD) samples is critical for maintaining the reliability and trustworthiness of machine learning systems. Recently, Large Language Models (LLMs) have demonstrated their effectiveness not only in…

Machine Learning · Computer Science 2025-02-17 Ruiyao Xu , Kaize Ding

In recent years, large language models (LLMs) have achieved strong performance on benchmark tasks, especially in zero or few-shot settings. However, these benchmarks often do not adequately address the challenges posed in the real-world,…

Computation and Language · Computer Science 2023-05-29 Rohan Bhambhoria , Lei Chen , Xiaodan Zhu

This paper describes a cascading multimodal pipeline for high-resolution biodiversity mapping across Europe, integrating species distribution modeling, biodiversity indicators, and habitat classification. The proposed pipeline first…

Artificial Intelligence · Computer Science 2025-04-08 César Leblanc , Lukas Picek , Benjamin Deneu , Pierre Bonnet , Maximilien Servajean , Rémi Palard , Alexis Joly

Knowing where a particular species can or cannot be found on Earth is crucial for ecological research and conservation efforts. By mapping the spatial ranges of all species, we would obtain deeper insights into how global biodiversity is…

Computer Vision and Pattern Recognition · Computer Science 2025-06-09 Christian Lange , Max Hamilton , Elijah Cole , Alexander Shepard , Samuel Heinrich , Angela Zhu , Subhransu Maji , Grant Van Horn , Oisin Mac Aodha

Large Language Models (LLMs) have transformed natural language processing and extended their powerful capabilities to multi-modal domains. As LLMs continue to advance, it is crucial to develop diverse and appropriate metrics for their…

Machine Learning · Computer Science 2024-10-15 Lai Wei , Zhiquan Tan , Chenghai Li , Jindong Wang , Weiran Huang

Recent advances in large language models (LLMs) have provided new opportunities for decision-making, particularly in the task of automated feature selection. In this paper, we first comprehensively evaluate LLM-based feature selection…

Machine Learning · Computer Science 2025-12-12 Jianhao Li , Xianchao Xiu

Monitoring species distribution is vital for conservation efforts, enabling the assessment of environmental impacts and the development of effective preservation strategies. Traditional data collection methods, including citizen science,…

Machine Learning · Computer Science 2025-10-23 Chirag Padubidri , Pranesh Velmurugan , Andreas Lanitis , Andreas Kamilaris