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An open source software package for modelling thermal neutron transport is presented. The code facilitates Monte Carlo-based transport simulations and focuses in the initial release on interactions in both mosaic single crystals as well as…

Computational Physics · Physics 2019-11-06 Xiao-Xiao Cai , Thomas Kittelmann

Recent advances in nuclear structure theory have significantly enlarged the accessible part of the nuclear landscape via ab initio many-body calculations. These developments open new ways for microscopic studies of light, medium-mass and…

Nuclear Theory · Physics 2021-01-07 Kai Hebeler

Modern atomic physics applications in science and technology pose ever higher demands on the precision of computations of properties of atoms and ions. Especially challenging is the modeling of electronic correlations within the…

Atomic Physics · Physics 2025-03-04 Pavlo Bilous , Charles Cheung , Marianna Safronova

A Geant4-based Python/C++ simulation and coding framework, which has been developed and used in order to aid the R&D efforts for thermal neutron detectors at neutron scattering facilities, is described. Built upon configurable geometry and…

Instrumentation and Detectors · Physics 2014-07-24 Thomas Kittelmann , Irina Stefanescu , Kalliopi Kanaki , Mirko Boin , Richard Hall-Wilton , Karl Zeitelhack

We describe pynucastro 2.0, an open source library for interactively creating and exploring astrophysical nuclear reaction networks. We demonstrate new methods for approximating rates and using detailed balance to create reverse rates, show…

Instrumentation and Methods for Astrophysics · Physics 2022-10-19 Alexander Smith Clark , Eric T. Johnson , Zhi Chen , Kiran Eiden , Donald E. Willcox , Brendan Boyd , Lyra Cao , Christopher J. DeGrendele , Michael Zingale

Machine learning development critically depends on access to high-quality data. However, increasing restrictions due to privacy, proprietary interests, and ethical concerns have created significant barriers to data accessibility. Synthetic…

Machine Learning · Computer Science 2025-11-14 Ivona Krchova , Mariana Vargas Vieyra , Mario Scriminaci , Andrey Sidorenko

Blini is a tool for quick lookup of nucleotide sequences in databases, and for quick dereplication of sequence collections. It is meant to help clean and characterize large collections of assembled contigs or long sequences that would…

Quantitative Methods · Quantitative Biology 2025-11-26 Amit Lavon

Merlin++ is a C++ charged-particle tracking library developed for the simulation and analysis of complex beam dynamics within high energy particle accelerators. Accurate simulation and analysis of particle dynamics is an essential part of…

The thermodynamic binding networks (TBN) model is a tool for studying engineered molecular systems. The TBN model allows one to reason about their behavior through a simplified abstraction that ignores details about molecular composition,…

Emerging Technologies · Computer Science 2021-05-13 David Haley , David Doty

Numerical tensor calculus comprise basic tensor operations such as the entrywise addition and contraction of higher-order tensors. We present, TLib, flexible tensor framework with generic tensor functions and tensor classes that assists…

Mathematical Software · Computer Science 2017-11-30 Cem Bassoy

To provide a practitioner's introduction to the study of the nuclear pasta, this article presents a brief review of the evolution of the methods used to study nucleon dynamics. This is followed with a more complete description of the…

Nuclear Theory · Physics 2011-11-08 Claudio O. Dorso , Pedro A. Giménez Molinelli , Jorge A. López

Ab initio calculations in Nuclear physics for atomic nuclei require a specific knowledge of the interactions among their constituents, protons and neutrons. In particular, NN interactions can be constrained down to scale resolutions of…

Nuclear Theory · Physics 2020-01-08 Enrique Ruiz Arriola , Jose Enrique Amaro , Rodrigo Navarro Perez

The Atom portal, udel.edu/atom, provides the scientific community with easily accessible high-quality data about properties of atoms and ions, such as energies, transition matrix elements, transition rates, radiative lifetimes, branching…

The NuCLS dataset contains over 220.000 annotations of cell nuclei in breast cancers. We show how to use these data to create a multi-rater model with the MIScnn Framework to automate the analysis of cell nuclei. For the model creation, we…

Computer Vision and Pattern Recognition · Computer Science 2023-02-02 Adrian Pfleiderer , Dominik Müller , Frank Kramer

Current needs of nuclear science and technology include complete, well-documented, and easily verifiable nuclear data. The complete data records require supporting nuclear bibliography, presently stored in dedicated libraries, in addition,…

Data Analysis, Statistics and Probability · Physics 2022-03-30 V. V. Zerkin , B. Pritychenko , J. Totans , L. Vrapcenjak , A. Rodionov , G. I. Shulyak

Robotic Template Library (RTL) is a set of tools for dealing with geometry and point cloud processing, especially in robotic applications. The software package covers basic objects such as vectors, line segments, quaternions, rigid…

Robotics · Computer Science 2021-11-02 Ales Jelinek , Adam Ligocki , Ludek Zalud

The present paper is comprised of two parts. First, we give a brief survey of the theoretical framework for microscopic nuclear structure calculations starting from a free nucleon-nucleon potential. Then, we present some selected results of…

Nuclear Theory · Physics 2007-05-23 A. Covello , L. Coraggio , A. Gargano , N. Itaco

We introduce giotto-tda, a Python library that integrates high-performance topological data analysis with machine learning via a scikit-learn-compatible API and state-of-the-art C++ implementations. The library's ability to handle various…

We present Sigma Web interface which provides user-friendly access for online analysis and plotting of the evaluated and experimental nuclear reaction data stored in the ENDF-6 and EXFOR formats. The interface includes advanced browsing and…

Data Analysis, Statistics and Probability · Physics 2015-03-17 B. Pritychenko , A. A. Sonzogni

We present the first version of the QEngine, an open-source C++ library for simulating and controlling ultracold quantum systems using optimal control theory (OCT). The most notable systems presented here are Bose-Einstein condensates,…

Quantum Physics · Physics 2019-07-24 Jens Jakob Sørensen , Jesper Jensen , Till Heinzel , Jacob Sherson
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