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Macrophages play an essential role in wound healing due to their dynamic nature and functional plasticity, exhibiting highly heterogeneous morpho-kinetic behaviors depending on their activation states. However, quantitative analysis of…

Quantitative Methods · Quantitative Biology 2025-07-28 Seol Ah Park , Giulia Lupi , Resul Ozbilgic , Michal Kollar , Aneta A. Ozvat , Mai Nguyen-Chi , Karol Mikula

-In recent years, there has been an increased focus on the mechanics of information transmission in spiking neural networks. Especially the Noise Shaping properties of these networks and their similarity to Delta-Sigma Modulators has…

Emerging Technologies · Computer Science 2014-08-11 C. Mayr , R. Schüffny

We investigate the collective behavior of suspended thermoresponsive microgels, that expel solvent and subsequently decrease in size upon heating. Using a binary mixture of differently thermoresponsive microgels, we demonstrate how…

We study the evolution of a random weighted network with complex nonlinear dynamics at each node, whose activity may cease as a result of interactions with other nodes. Starting from a knowledge of the micro-level behaviour at each node, we…

Statistical Mechanics · Physics 2007-05-23 Sitabhra Sinha , Sudeshna Sinha

Intelligent biological systems are characterized by their embodiment in a complex environment and the intimate interplay between their nervous systems and the nonlinear mechanical properties of their bodies. This coordination, in which the…

Machine Learning · Computer Science 2023-02-02 Deniz Oktay , Mehran Mirramezani , Eder Medina , Ryan P. Adams

The behavior of materials is influenced by a wide range of phenomena occurring across various time and length scales. To better understand the impact of microstructure on macroscopic response, multiscale modeling strategies are essential.…

Dimension reduction is a common strategy to study non-linear dynamical systems composed by a large number of variables. The goal is to find a smaller version of the system whose time evolution is easier to predict while preserving some of…

Dynamical Systems · Mathematics 2022-06-23 Marina Vegué , Vincent Thibeault , Patrick Desrosiers , Antoine Allard

The dynamics of cascading failures in spatial interdependent networks significantly depend on the interaction range of dependency couplings between layers. In particular, for increasing range of dependency couplings, different types of…

Physics and Society · Physics 2023-07-07 Bnaya Gross , Ivan Bonamassa , Shlomo Havlin

Although part-based motion synthesis networks have been investigated to reduce the complexity of modeling heterogeneous human motions, their computational cost remains prohibitive in interactive applications. To this end, we propose a novel…

Graphics · Computer Science 2023-06-22 Shuaiying Hou , Hongyu Tao , Hujun Bao , Weiwei Xu

Networks describing the interaction of the elements that constitute a complex system grow and develop via a number of different mechanisms, such as the addition and deletion of nodes, the addition and deletion of edges, as well as the…

Molecular Networks · Quantitative Biology 2010-06-09 Arend Hintze , Christoph Adami

Recent remarkable progress in wave-front shaping has enabled control of light propagation inside linear media to focus and image through scattering objects. In particular, light propagation in multimode fibers comprises complex intermodal…

Adaptation and Self-Organizing Systems · Physics 2017-07-17 Omer Tzang , Antonio M. Caravaca-Aguirre , Kelvin Wagner , Rafael Piestun

Shape transformation is crucial for the survival, adaptation, predation, defense, and reproduction of organisms in complex environments. It also serves as a key mechanism for the development of various applications, including soft robotics,…

Applied Physics · Physics 2024-10-17 Xiaoyu Su

Diverse biological networks exhibit universal features distinguished from those of random networks, calling much attention to their origins and implications. Here we propose a minimal evolution model of Boolean regulatory networks, which…

Molecular Networks · Quantitative Biology 2014-11-26 Deok-Sun Lee

The effect of different Monte Carlo move sets on the the folding kinetics of lattice polymer chains is studied from the geometry of the conformation-network. The networks have the characteristics of small- world. The Monte Carlo move, rigid…

Statistical Mechanics · Physics 2009-11-11 Yu-Pin Luo , Hung-Yeh Lin , Ming-Chang Huang , Tsong-Ming Liaw

Brain morphology is shaped by genetic and mechanical factors and is linked to biological development and diseases. Its fractal-like features, regional anisotropy, and complex curvature distributions hinder quantitative insights in medical…

Neurons and Cognition · Quantitative Biology 2025-09-09 Yingjie Zhao , Yicheng Song , Fan Xu , Zhiping Xu

A growing body of evidence suggests that the structure of mitochondrial networks is poised near criticality, an intermediate regime lying in between order and disorder. Such description fits well with the idea that biological systems, in…

Biological Physics · Physics 2020-11-02 Nahuel Zamponi , Emiliano Zamponi , Sergio A Cannas , Dante R Chialvo

Spreading processes are conventionally monitored on a macroscopic level by counting the number of incidences over time. The spreading process can then be modeled either on the microscopic level, assuming an underlying interaction network,…

Neurons and Cognition · Quantitative Biology 2020-02-12 Johannes Zierenberg , Jens Wilting , Viola Priesemann , Anna Levina

Behavioral changes in animals and humans, as a consequence of an error or a verbal instruction, can be extremely rapid. Improvement in behavioral performances are usually associated in machine learning and reinforcement learning to synaptic…

Neurons and Cognition · Quantitative Biology 2025-03-12 Cristiano Capone , Luca Falorsi

We consider the morphology of two dimensional cracks observed in experimental results obtained from paper samples and compare these results with the numerical simulations of the random fuse model (RFM). We demonstrate that the data obey…

Disordered Systems and Neural Networks · Physics 2009-11-11 Mikko J. Alava , Phani K. V. V. Nukala , Stefano Zapperi

We consider, computationally and experimentally, the scaling properties of force networks in the systems of circular particles exposed to compression in two spatial dimensions. The simulations consider polydisperse and monodisperse…

Computational Physics · Physics 2016-04-20 Lenka Kovalcinova , Arnaud Goullet , Lou Kondic