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Graph-based clustering has shown promising performance in many tasks. A key step of graph-based approach is the similarity graph construction. In general, learning graph in kernel space can enhance clustering accuracy due to the…
Let F be a finite set of graphs. In the F-Deletion problem, we are given an n-vertex graph G and an integer k as input, and asked whether at most k vertices can be deleted from G such that the resulting graph does not contain a graph from F…
We show that for a number of parameterized problems for which only $2^{O(k)} n^{O(1)}$ time algorithms are known on general graphs, subexponential parameterized algorithms with running time $2^{O(k^{1-\frac{1}{1+\delta}} \log^2 k)}…
We propose a novel graph clustering method guided by additional information on the underlying structure of the clusters (or communities). The problem is formulated as the matching of a graph to a template with smaller dimension, hence…
We give the first linear kernels for the (Connected) Dominating Set problems on H-topological minor free graphs. We prove the existence of polynomial time algorithms that, for a given H-topological-minor-free graph G and a positive integer…
For a class $\mathcal{H}$ of graphs, #Sub$(\mathcal{H})$ is the counting problem that, given a graph $H\in \mathcal{H}$ and an arbitrary graph $G$, asks for the number of subgraphs of $G$ isomorphic to $H$. It is known that if $\mathcal{H}$…
Let $G$ be a unit disk graph in the plane defined by $n$ disks whose positions are known. For the case when $G$ is unweighted, we give a simple algorithm to compute a shortest path tree from a given source in $O(n\log n)$ time. For the case…
Graph separation and partitioning are fundamental problems that have been extensively studied both in theory and practice. The \textsc{$p$-Size Separator} problem, closely related to the \textsc{Balanced Separator} problem, is to check…
Given a set $P$ of $n$ points in the plane and a collection of disks centered at these points, the disk graph $G(P)$ has vertex set $P$, with an edge between two vertices if their corresponding disks intersect. We study the dominating set…
Given a graph $G$, let $vc(G)$ and $vc^+(G)$ be the sizes of a minimum and a maximum minimal vertex covers of $G$, respectively. We say that $G$ is well covered if $vc(G)=vc^+(G)$ (that is, all minimal vertex covers have the same size).…
Unit disk graphs are intersection graphs of circles of unit radius in the plane. We present simple and provably good heuristics for a number of classical NP-hard optimization problems on unit disk graphs. The problems considered include…
In this paper, we devise a scheme for kernelizing, in sublinear space and polynomial time, various problems on planar graphs. The scheme exploits planarity to ensure that the resulting algorithms run in polynomial time and use O((sqrt(n) +…
We describe an algorithm that recognizes some (perhaps all) intrinsically knotted (IK) graphs, and can help find knotless embeddings for graphs that are not IK. The algorithm, implemented as a Mathematica program, has already been used by…
The Subgraph Isomorphism problem asks, given a host graph G on n vertices and a pattern graph P on k vertices, whether G contains a subgraph isomorphic to P. The restriction of this problem to planar graphs has often been considered. After…
An induced subgraph is called an induced matching if each vertex is a degree-1 vertex in the subgraph. The \textsc{Almost Induced Matching} problem asks whether we can delete at most $k$ vertices from the input graph such that the remaining…
In the $\mathcal{F}$-Minor-Free Deletion problem one is given an undirected graph $G$, an integer $k$, and the task is to determine whether there exists a vertex set $S$ of size at most $k$, so that $G-S$ contains no graph from the finite…
A graph $G$ is called a \emph{block graph} if each maximal $2$-connected component of $G$ is a clique. In this paper we study the Block Graph Vertex Deletion from the perspective of fixed parameter tractable (FPT) and kernelization…
In this paper, we present an algorithm for computing a feedback vertex set of a unit disk graph of size $k$, if it exists, which runs in time $2^{O(\sqrt{k})}(n+m)$, where $n$ and $m$ denote the numbers of vertices and edges, respectively.…
The parameterized analysis of graph modification problems represents the most extensively studied area within Parameterized Complexity. Given a graph $G$ and an integer $k\in\mathbb{N}$ as input, the goal is to determine whether we can…
A (unit) disk graph is the intersection graph of closed (unit) disks in the plane. Almost three decades ago, an elegant polynomial-time algorithm was found for \textsc{Maximum Clique} on unit disk graphs [Clark, Colbourn, Johnson; Discrete…