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We address the problem of estimating steady-state quantities associated to systems of stochastic chemical kinetics. In most cases of interest these systems are analytically intractable, and one has to resort to computational methods to…

Quantitative Methods · Quantitative Biology 2014-01-21 Andreas Milias-Argeitis , John Lygeros , Mustafa Khammash

Motivated by a class of nonlinear imaging inverse problems, for instance, multispectral computed tomography (MSCT), this paper studies the convergence theory of the nonlinear Kaczmarz method (NKM) for solving the system of nonlinear…

Numerical Analysis · Mathematics 2025-01-08 Yu Gao , Chong Chen

The randomized coordinate descent (RCD) method is a classical algorithm with simple, lightweight iterations that is widely used for various optimization problems, including the solution of positive semidefinite linear systems. As a linear…

Numerical Analysis · Mathematics 2026-02-13 Jackie Lok , Elizaveta Rebrova

The residual cutting (RC) method has been proposed as an outer-inner loop iteration for efficiently solving large and sparse linear systems of equations arising in solving numerically problems of elliptic partial differential equations.…

Numerical Analysis · Mathematics 2026-03-23 Toshihiko Abe

Markov chain Monte Carlo (MCMC) algorithms provide a very general recipe for estimating properties of complicated distributions. While their use has become commonplace and there is a large literature on MCMC theory and practice, MCMC users…

Computation · Statistics 2012-05-03 Murali Haran , Luke Tierney

Large statically indeterminate truss and frame structures exhibit complex load-bearing behavior, and redundancy matrices are helpful for their analysis and design. Depending on the task, the full redundancy matrix or only its diagonal…

Computational Engineering, Finance, and Science · Computer Science 2024-02-14 Anton Tkachuk , Tim Krake , Jan Gade , Malte von Scheven

The velocity errors of the classical marker and cell (MAC) scheme are dependent on the pressure approximation errors, which is non-pressure-robust and will cause the accuracy of the velocity approximation to deteriorate when the pressure…

Numerical Analysis · Mathematics 2025-04-01 Binghong Li , Xiaoli Li , Xu Li , Hongxing Rui

Efficient arithmetic circuit design for resourceconstrained hardware involves challenging combinatorial optimization problems, among which Multiple Constant Multiplication (MCM) is a prominent example. MCM aims at implementing…

Hardware Architecture · Computer Science 2026-05-26 Théo Cantaloube , Nicolai Fiege , Anastasia Volkova , Christine Solnon

Model Predictive Control (MPC) is a widely known control method that has proved to be particularly effective in multivariable and constrained control. Closed-loop stability and recursive feasibility can be guaranteed by employing accurate…

Systems and Control · Electrical Eng. & Systems 2025-02-05 Marco Polver , Daniel Limon , Fabio Previdi , Antonio Ferramosca

In this paper, we present a robust adaptive model predictive control (MPC) scheme for linear systems subject to parametric uncertainty and additive disturbances. The proposed approach provides a computationally efficient formulation with…

Systems and Control · Electrical Eng. & Systems 2020-03-12 Johannes Köhler , Elisa Andina , Raffaele Soloperto , Matthias A. Müller , Frank Allgöwer

Algebraic Riccati equations with indefinite quadratic terms play an important role in applications related to robust controller design. While there are many established approaches to solve these in case of small-scale dense coefficients,…

Numerical Analysis · Mathematics 2023-01-13 Peter Benner , Jan Heiland , Steffen W. R. Werner

Determining kinetic rate constants is a highly relevant problem in biochemistry, so various methods have been designed to extract them from experimental data. Such methods have two main components: the experimental apparatus and the…

Quantitative Methods · Quantitative Biology 2017-08-04 József Vass , Sergey N. Krylov

Contention resolution schemes have proven to be an incredibly powerful concept which allows to tackle a broad class of problems. The framework has been initially designed to handle submodular optimization under various types of constraints,…

Data Structures and Algorithms · Computer Science 2018-11-27 Marek Adamczyk , Michał Włodarczyk

Many problems of practical interest rely on Continuous-time Markov chains~(CTMCs) defined over combinatorial state spaces, rendering the computation of transition probabilities, and hence probabilistic inference, difficult or impossible…

This paper proposes a novel iterative algorithm to compute the stabilizing solution of regime-switching stochastic game-theoretic Riccati differential equations with periodic coefficients. The method decomposes the original complex…

Numerical Analysis · Mathematics 2025-11-11 Yiyuan Wang

Motivated by robust matrix recovery problems such as Robust Principal Component Analysis, we consider a general optimization problem of minimizing a smooth and strongly convex loss function applied to the sum of two blocks of variables,…

Machine Learning · Computer Science 2019-11-19 Dan Garber , Shoham Sabach , Atara Kaplan

In [1] is proposed a simplified DeC method, that, when combined with the residual distribution (RD) framework, allows to construct a high order, explicit FE scheme with continuous approximation avoiding the inversion of the mass matrix for…

Numerical Analysis · Mathematics 2022-11-17 Rémi Abgrall , Elise Le Mélédo , Philipp Öffner , Davide Torlo

Reversibility, weak reversibility and deficiency, detailed and complex balancing are generally not "encoded" in the kinetic differential equations but they are realization properties that may imply local or even global asymptotic stability…

Molecular Networks · Quantitative Biology 2011-05-11 Gabor Szederkenyi , Katalin M. Hangos

The reverse Monte Carlo (RMC) method is widely used in structural modelling and analysis of experimental data. More recently, RMC has been applied to the calculation of equilibrium thermodynamic properties and dynamic problems. These…

Other Condensed Matter · Physics 2022-12-02 Akash Kumar Ball , Suhail Haque , Abhijit Chatterjee

Consistency models are a class of generative models that enable few-step generation for diffusion and flow matching models. While consistency models have achieved promising results on Euclidean domains like images, their applications to…

Machine Learning · Computer Science 2025-11-04 Chaoran Cheng , Yusong Wang , Yuxin Chen , Xiangxin Zhou , Nanning Zheng , Ge Liu