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Nanotubes and nanoporous materials are being made by solid state diffusion utilizing the Kirkendall effect. Recently published manuscripts have shown that the product phase grows with an oriented microstructure. Based on the requirement of…

Materials Science · Physics 2015-08-04 Aloke Paul

In this paper we focus on crystal surfaces led out of equilibrium by a growth or erosion process. As a consequence of that the surface may undergo morphological instabilities and develop a distinct structure: ondulations, mounds or…

Materials Science · Physics 2015-06-05 Paolo Politi

The structure and dynamics of tissue cultures depend strongly on the physical and chemical properties of the underlying substrate. Inspired by previous advances in the context of inorganic materials, the use of patterned culture surfaces…

Soft Condensed Matter · Physics 2020-12-30 Diogo E. P. Pinto , Gonca Erdemci-Tandogan , M. Lisa Manning , Nuno A. M. Araujo

Bacteria can form a great variety of spatially heterogeneous cell density patterns, ranging from simple concentric rings to dynamical spiral waves appearing in growing colonies. These pattern formation phenomena are important as they…

Populations and Evolution · Quantitative Biology 2025-01-17 John S. Chuang , Riccardo Rao , Stanislas Leibler

Inhomogeneities in deposition may lead to formation of rough surfaces, whose height fluctuations can be probed directly by scanning microscopy, or indirectly by scattering. Analytical or numerical treatments of simple growth models suggest…

Condensed Matter · Physics 2009-10-28 Mehran Kardar

Directed growth, anisotropic cell shapes, and confinement drive self-organization in multicellular systems. We investigate the influence of particle shape on the distribution and dynamics of nematic microdomains in a minimal in-silico model…

Soft Condensed Matter · Physics 2025-12-03 Jonas Isensee , Philip Bittihn

The relaxation of axisymmetric crystal surfaces with a single facet below the roughening transition is studied via a continuum approach that accounts for step energy g_1 and step-step interaction energy g_3>0. For diffusion-limited…

Materials Science · Physics 2009-11-10 Dionisios Margetis , Michael J. Aziz , Howard A. Stone

We examine the budding of a nanoscale particle through a lipid bilayer using molecular dynamics simulations, free energy calculations, and an elastic theory, with the aim of determining the extent to which equilibrium elasticity theory can…

Subcellular Processes · Quantitative Biology 2012-02-22 Teresa Ruiz-Herrero , Enrique Velasco , Michael F. Hagan

Stable Diffusion is a popular Transformer-based model for image generation from text; it applies an image information creator to the input text and the visual knowledge is added in a step-by-step fashion to create an image that corresponds…

Image and Video Processing · Electrical Eng. & Systems 2024-04-02 Zhen Gao , Lini Yuan , Pedro Reviriego , Shanshan Liu , Fabrizio Lombardi

We survey our research on modeling the mechanisms of control of uniformity in growth of nanosize and colloid particles. The former are produced as nanocrystals, by burst-nucleation from solution. The latter, colloid-size particles, are…

Soft Condensed Matter · Physics 2010-10-12 Vladimir Privman

We propose a two-scale model to resolve essential features of developmental tissue deformations. The model couples individual cellular behavior to the mechanics at tissue scale. This is realized by a multiphase-field model addressing the…

Soft Condensed Matter · Physics 2025-06-25 Lea Happel , Axel Voigt

The interior of nanoscale crystals experiences stress that compensates the capillary forces and that can be large, in the order of 1 GPa. Various studies have speculated on whether and how this surface-induced stress affects the stability…

Materials Science · Physics 2018-02-07 Nadiia Mameka , Jürgen Markmann , Jörg Weissmüller

We have developed a continuum model that explains the complex surface shapes observed in epitaxial regrowth on micron scale gratings. This model describes the dependence of the surface morphology on film thickness and growth temperature in…

Materials Science · Physics 2007-05-23 A. Ballestad , T. Tiedje , J. H. Schmid , B. J. Ruck , M. Adamcyk

A simple, discrete, parametric model is proposed to describe conditional (correlated) deposition of particles on a surface and formation of a connecting (percolating) cluster. The surface changes spontaneously its properties (phase…

Statistical Mechanics · Physics 2007-05-23 Ana Proykova , Boris Karadjov

We present extensive results from 2-dimensional simulations of phase separation kinetics in a model with order-parameter dependent mobility. We find that the time-dependent structure factor exhibits dynamical scaling and the scaling…

Condensed Matter · Physics 2009-10-30 Sanjay Puri , Alan Bray , Joel Lebowitz

We study irreversible dimer nucleation on top of terraces during epitaxial growth in one and two dimensions, for all values of the step-edge barrier. The problem is solved exactly by transforming it into a first passage problem for a random…

Statistical Mechanics · Physics 2007-05-23 Paolo Politi , Claudio Castellano

Crystal structure generation is a foundational challenge in materials discovery, particularly in designing functional inorganic crystalline materials with desired properties. Most existing diffusion-based generative models for crystals rely…

Materials Science · Physics 2025-05-13 Sourav Mal , Subhankar Mishra , Prasenjit Sen

We consider the growth of a vicinal crystal surface in the presence of a step-edge barrier. For any value of the barrier strength, measured by the length l_es, nucleation of islands on terraces is always able to destroy asymptotically…

Statistical Mechanics · Physics 2007-05-23 Daniele Vilone , Claudio Castellano , Paolo Politi

We consider the diffusion and spreading of chainlike molecules on solid surfaces. We first show that the steep spherical cap shape density profiles, observed in some submonolayer experiments on spreading polymer films, imply that the…

Soft Condensed Matter · Physics 2009-10-31 T. Hjelt , S. Herminghaus , T. Ala-Nissila , S. C. Ying

We report a combined experimental and simulation study of deformation-induced diffusion in compacted two-dimensional amorphous granular pillars, in which thermal fluctuations play negligible role. The pillars, consisting of bidisperse…

Soft Condensed Matter · Physics 2015-07-21 Wenbin Li , Jennifer M. Rieser , Andrea J. Liu , Douglas J. Durian , Ju Li
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