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The rise of graph analytic systems has created a need for ways to measure and compare the capabilities of these systems. Graph analytics present unique scalability difficulties. The machine learning, high performance computing, and visual…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-03-07 Siddharth Samsi , Vijay Gadepally , Michael Hurley , Michael Jones , Edward Kao , Sanjeev Mohindra , Paul Monticciolo , Albert Reuther , Steven Smith , William Song , Diane Staheli , Jeremy Kepner

Supervised learning on graphs is a challenging task due to the high dimensionality and inherent structural dependencies in the data, where each edge depends on a pair of vertices. Existing conventional methods are designed for standard…

Methodology · Statistics 2024-06-27 Cencheng Shen , Shangsi Wang , Alexandra Badea , Carey E. Priebe , Joshua T. Vogelstein

Graph isomorphism is an important problem as its worst-case time complexity is not yet fully understood. In this study, we try to draw parallels between a related optimization problem called point set registration. A graph can be…

Optimization and Control · Mathematics 2021-11-19 Yigit Oktar

The criteria for determining graph isomorphism are crucial for solving graph isomorphism problems. The necessary condition is that two isomorphic graphs possess invariants, but their function can only be used to filtrate and subdivide…

Graphics · Computer Science 2025-08-19 Chuanfu Hu , Aimin Hou

The Graph Isomorphism problem has both theoretical and practical interest. In this paper we present an algorithm, called conauto-1.2, that efficiently tests whether two graphs are isomorphic, and finds an isomorphism if they are. This…

Data Structures and Algorithms · Computer Science 2011-06-23 Jose Luis Lopez-Presa , Antonio Fernandez Anta

This paper proposes a new general technique for maximal subgraph enumeration which we call proximity search, whose aim is to design efficient enumeration algorithms for problems that could not be solved by existing frameworks. To support…

Data Structures and Algorithms · Computer Science 2021-08-19 Alessio Conte , Andrea Marino , Roberto Grossi , Takeaki Uno , Luca Versari

Determining whether two graphs are structurally identical is a fundamental problem with applications spanning mathematics, computer science, chemistry, and network science. Despite decades of study, graph isomorphism remains a challenging…

Computational Physics · Physics 2026-04-10 Sara Najem , Amer E. Mouawad

This study develops a graph search algorithm to find the optimal discrimination path for the binary classification problem. The objective function is defined as the difference of variations between the true positive (TP) and false positive…

Machine Learning · Computer Science 2024-01-10 Qinwu Xu

We present the first parallel fixed-parameter algorithm for subgraph isomorphism in planar graphs, bounded-genus graphs, and, more generally, all minor-closed graphs of locally bounded treewidth. Our randomized low depth algorithm has a…

Data Structures and Algorithms · Computer Science 2020-07-03 Lukas Gianinazzi , Torsten Hoefler

The graph isomorphism problem looks deceptively simple, but although polynomial-time algorithms exist for certain types of graphs such as planar graphs and graphs with bounded degree or eigenvalue multiplicity, its complexity class is still…

Discrete Mathematics · Computer Science 2025-07-11 Stefan Klus , Patrick Gelß

Hypergraphs are a useful abstraction for modeling multiway relationships in data, and hypergraph clustering is the task of detecting groups of closely related nodes in such data. Graph clustering has been studied extensively, and there are…

Data Structures and Algorithms · Computer Science 2020-07-02 Nate Veldt , Austin R. Benson , Jon Kleinberg

Graph sampling theory extends the traditional sampling theory to graphs with topological structures. As a key part of the graph sampling theory, subset selection chooses nodes on graphs as samples to reconstruct the original signal. Due to…

Information Theory · Computer Science 2022-01-03 Zhengpin Li , Zheng Wei , Jian Wang , Yun Lin , Byonghyo Shim

Reducing a graph while preserving its overall properties is an important problem with many applications. Typically, reduction approaches either remove edges (sparsification) or merge nodes (coarsening) in an unsupervised way with no…

Machine Learning · Computer Science 2025-04-09 Maria Bånkestad , Jennifer R. Andersson , Sebastian Mair , Jens Sjölund

Graph isomorphism is an important computer science problem. The problem for the general case is unknown to be in polynomial time. The base algorithm for the general case works in quasi-polynomial time. The solutions in polynomial time for…

Discrete Mathematics · Computer Science 2017-11-23 Vaibhav Amit Patel

Finding dense subgraphs of a large graph is a standard problem in graph mining that has been studied extensively both for its theoretical richness and its many practical applications. In this paper we introduce a new family of dense…

Data Structures and Algorithms · Computer Science 2021-06-07 Nate Veldt , Austin R. Benson , Jon Kleinberg

The graph isomorphism problem is considered. We assign modified $n$-variable characteristic polynomials for graphs and reduce the graph isomorphism problem to the problem of the polynomials isomorphism. It is required to find out, is there…

Discrete Mathematics · Computer Science 2024-10-18 Alexander Prolubnikov

The problem of Subgraph Isomorphism is defined as follows: Given a pattern H and a host graph G on n vertices, does G contain a subgraph that is isomorphic to H? Eppstein [SODA 95, J'GAA 99] gives the first linear time algorithm for…

Data Structures and Algorithms · Computer Science 2009-09-28 Frederic Dorn

Given a query graph that represents a pattern of interest, the emerging pattern detection problem can be viewed as a continuous query problem on a dynamic graph. We present an incremental algorithm for continuous query processing on dynamic…

Databases · Computer Science 2014-07-15 Sutanay Choudhury , Lawrence Holder , George Chin , Patrick Mackey , Khushbu Agarwal , John Feo

Subgraph isomorphism counting is known as #P-complete and requires exponential time to find the accurate solution. Utilizing representation learning has been shown as a promising direction to represent substructures and approximate the…

Machine Learning · Computer Science 2024-05-14 Xin Liu , Weiqi Wang , Jiaxin Bai , Yangqiu Song

The Subgraph Isomorphism problem asks, given a host graph G on n vertices and a pattern graph P on k vertices, whether G contains a subgraph isomorphic to P. The restriction of this problem to planar graphs has often been considered. After…

Discrete Mathematics · Computer Science 2015-03-19 Paul Bonsma