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Recently there has been a surge of interest in designing graph embedding methods. Few, if any, can scale to a large-sized graph with millions of nodes due to both computational complexity and memory requirements. In this paper, we relax…

Artificial Intelligence · Computer Science 2020-08-17 Jiongqian Liang , Saket Gurukar , Srinivasan Parthasarathy

Graph Transformer (GT) has recently emerged as a promising neural network architecture for learning graph-structured data. However, its global attention mechanism with quadratic complexity concerning the graph scale prevents wider…

Machine Learning · Computer Science 2024-12-09 Ningyi Liao , Zihao Yu , Siqiang Luo

Neural networks have been shown to be an effective tool for learning algorithms over graph-structured data. However, graph representation techniques---that convert graphs to real-valued vectors for use with neural networks---are still in…

Machine Learning · Computer Science 2018-10-10 Shaileshh Bojja Venkatakrishnan , Mohammad Alizadeh , Pramod Viswanath

Recent work on graph generative models has made remarkable progress towards generating increasingly realistic graphs, as measured by global graph features such as degree distribution, density, and clustering coefficients. Deep generative…

Machine Learning · Computer Science 2021-06-30 Kiarash Zahirnia , Ankita Sakhuja , Oliver Schulte , Parmis Nadaf , Ke Li , Xia Hu

How can we find the right graph for semi-supervised learning? In real world applications, the choice of which edges to use for computation is the first step in any graph learning process. Interestingly, there are often many types of…

Machine Learning · Computer Science 2020-07-24 Jonathan Halcrow , Alexandru Moşoi , Sam Ruth , Bryan Perozzi

The rapid growth of graph data creates significant scalability challenges as most graph algorithms scale quadratically with size. To mitigate these issues, Graph Condensation (GC) methods have been proposed to learn a small graph from a…

Machine Learning · Computer Science 2025-08-06 Shengbo Gong , Mohammad Hashemi , Juntong Ni , Carl Yang , Wei Jin

Graph embedding methods transform high-dimensional and complex graph contents into low-dimensional representations. They are useful for a wide range of graph analysis tasks including link prediction, node classification, recommendation and…

Machine Learning · Computer Science 2019-12-03 Bhagya Hettige , Yuan-Fang Li , Weiqing Wang , Wray Buntine

Drug Discovery is a fundamental and ever-evolving field of research. The design of new candidate molecules requires large amounts of time and money, and computational methods are being increasingly employed to cut these costs. Machine…

Machine Learning · Statistics 2021-05-28 Pietro Bongini , Monica Bianchini , Franco Scarselli

Graph Representation Learning (GRL) has experienced significant progress as a means to extract structural information in a meaningful way for subsequent learning tasks. Current approaches including shallow embeddings and Graph Neural…

Machine Learning · Computer Science 2020-06-19 Antonia Gogoglou , C. Bayan Bruss , Brian Nguyen , Reza Sarshogh , Keegan E. Hines

Deep learning on graphs has become a popular research topic with many applications. However, past work has concentrated on learning graph embedding tasks, which is in contrast with advances in generative models for images and text. Is it…

Machine Learning · Computer Science 2018-02-13 Martin Simonovsky , Nikos Komodakis

Graph representation learning has recently been applied to a broad spectrum of problems ranging from computer graphics and chemistry to high energy physics and social media. The popularity of graph neural networks has sparked interest, both…

Machine Learning · Computer Science 2020-11-05 Fabrizio Frasca , Emanuele Rossi , Davide Eynard , Ben Chamberlain , Michael Bronstein , Federico Monti

Diffusion-based generative graph models have been proven effective in generating high-quality small graphs. However, they need to be more scalable for generating large graphs containing thousands of nodes desiring graph statistics. In this…

Machine Learning · Computer Science 2023-06-01 Xiaohui Chen , Jiaxing He , Xu Han , Li-Ping Liu

New algorithms for embedding graphs have reduced the asymptotic complexity of finding low-dimensional representations. One-Hot Graph Encoder Embedding (GEE) uses a single, linear pass over edges and produces an embedding that converges…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-02-08 Ariel Lubonja , Cencheng Shen , Carey Priebe , Randal Burns

Graphs are ubiquitous data structures for representing interactions between entities. With an emphasis on the use of graphs to represent chemical molecules, we explore the task of learning to generate graphs that conform to a distribution…

Machine Learning · Computer Science 2019-03-08 Qi Liu , Miltiadis Allamanis , Marc Brockschmidt , Alexander L. Gaunt

Recently, graph-based algorithms have drawn much attention because of their impressive success in semi-supervised setups. For better model performance, previous studies learn to transform the topology of the input graph. However, these…

Social and Information Networks · Computer Science 2020-10-15 Chen Li , Xutan Peng , Hao Peng , Jianxin Li , Lihong Wang , Philip S. Yu , Lifang He

Deep graph generative modeling has proven capable of learning the distribution of complex, multi-scale structures characterizing real-world graphs. However, one of the main limitations of existing methods is their large output space, which…

Machine Learning · Computer Science 2023-06-01 Nathaniel Diamant , Alex M. Tseng , Kangway V. Chuang , Tommaso Biancalani , Gabriele Scalia

Node classification and graph classification are two graph learning problems that predict the class label of a node and the class label of a graph respectively. A node of a graph usually represents a real-world entity, e.g., a user in a…

Computer Vision and Pattern Recognition · Computer Science 2019-04-11 Jia Li , Yu Rong , Hong Cheng , Helen Meng , Wenbing Huang , Junzhou Huang

Graph generation poses a significant challenge as it involves predicting a complete graph with multiple nodes and edges based on simply a given label. This task also carries fundamental importance to numerous real-world applications,…

Machine Learning · Computer Science 2024-02-21 Xiandong Zou , Xiangyu Zhao , Pietro Liò , Yiren Zhao

Graph embedding seeks to build a low-dimensional representation of a graph G. This low-dimensional representation is then used for various downstream tasks. One popular approach is Laplacian Eigenmaps, which constructs a graph embedding…

Machine Learning · Computer Science 2020-03-10 Leo Torres , Kevin S Chan , Tina Eliassi-Rad

Deep generative models have been praised for their ability to learn smooth latent representation of images, text, and audio, which can then be used to generate new, plausible data. However, current generative models are unable to work with…

Machine Learning · Computer Science 2019-09-09 Bidisha Samanta , Abir De , Gourhari Jana , Pratim Kumar Chattaraj , Niloy Ganguly , Manuel Gomez-Rodriguez