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Endoscopic procedures such as esophagogastroduodenoscopy (EGD) and colonoscopy play a critical role in diagnosing and managing gastrointestinal (GI) disorders. However, the documentation burden associated with these procedures place…

Computer Vision and Pattern Recognition · Computer Science 2025-10-07 Evandros Kaklamanos , Kristjana Kristinsdottir , Jonathan Huang , Dustin Carlson , Rajesh Keswani , John Pandolfino , Mozziyar Etemadi

Histopathology plays a pivotal role in medical diagnostics. In contrast to preparing permanent sections for histopathology, a time-consuming process, preparing frozen sections is significantly faster and can be performed during surgery,…

Image and Video Processing · Electrical Eng. & Systems 2023-10-18 Elad Yoshai , Gil Goldinger , Miki Haifler , Natan T. Shaked

Robust segmentation for non-elongated tissues in medical images is hard to realize due to the large variation of the shape, size, and appearance of these tissues in different patients. In this paper, we present an end-to-end trainable deep…

Image and Video Processing · Electrical Eng. & Systems 2020-04-06 Qian Yu , Yinghuan Shi , Yefeng Zheng , Yang Gao , Jianbing Zhu , Yakang Dai

The goal of automatic report generation is to generate a clinically accurate and coherent phrase from a single given X-ray image, which could alleviate the workload of traditional radiology reporting. However, in a real-world scenario,…

Computer Vision and Pattern Recognition · Computer Science 2023-11-13 Tiancheng Gu , Dongnan Liu , Zhiyuan Li , Weidong Cai

Annotations are necessary to develop computer vision algorithms for histopathology, but dense annotations at a high resolution are often time-consuming to make. Deep learning models for segmentation are a way to alleviate the process, but…

Computer Vision and Pattern Recognition · Computer Science 2022-11-15 Eduard Chelebian , Francesco Ciompi , Carolina Wählby

Vision Transformer (ViT) has emerged as a powerful architecture in the realm of modern computer vision. However, its application in certain imaging fields, such as microscopy and satellite imaging, presents unique challenges. In these…

Computer Vision and Pattern Recognition · Computer Science 2024-04-22 Yujia Bao , Srinivasan Sivanandan , Theofanis Karaletsos

The development of generative models in the past decade has allowed for hyperrealistic data synthesis. While potentially beneficial, this synthetic data generation process has been relatively underexplored in cancer histopathology. One…

Image and Video Processing · Electrical Eng. & Systems 2024-12-10 Aakash Madhav Rao , Debayan Gupta

The Segment Anything Model (SAM) marks a significant advancement in segmentation models, offering robust zero-shot abilities and dynamic prompting. However, existing medical SAMs are not suitable for the multi-scale nature of whole-slide…

Computer Vision and Pattern Recognition · Computer Science 2024-03-19 Hong Liu , Haosen Yang , Paul J. van Diest , Josien P. W. Pluim , Mitko Veta

This paper presents a novel framework for processing volumetric medical information using Visual Transformers (ViTs). First, We extend the state-of-the-art Swin Transformer model to the 3D medical domain. Second, we propose a new approach…

Image and Video Processing · Electrical Eng. & Systems 2024-06-06 Cristhian Forigua , Maria Escobar , Pablo Arbelaez

The extraction of labels from radiology text reports enables large-scale training of medical imaging models. Existing approaches to report labeling typically rely either on sophisticated feature engineering based on medical domain knowledge…

Computation and Language · Computer Science 2020-10-20 Akshay Smit , Saahil Jain , Pranav Rajpurkar , Anuj Pareek , Andrew Y. Ng , Matthew P. Lungren

Skin cancer is a global health concern, necessitating early and accurate diagnosis for improved patient outcomes. This study introduces a groundbreaking approach to skin cancer classification, employing the Vision Transformer, a…

Image and Video Processing · Electrical Eng. & Systems 2024-01-11 Galib Muhammad Shahriar Himel , Md. Masudul Islam , Kh Abdullah Al-Aff , Shams Ibne Karim , Md. Kabir Uddin Sikder

Medical imaging plays a crucial role in diagnosis, with radiology reports serving as vital documentation. Automating report generation has emerged as a critical need to alleviate the workload of radiologists. While machine learning has…

Image and Video Processing · Electrical Eng. & Systems 2024-07-08 Ibrahim Ethem Hamamci , Sezgin Er , Bjoern Menze

Deep learning methods have demonstrated promising results in predicting BI-RADS scores from mammography images. However, the interpretation of these images can vary, leading to discrepancies even among radiologists. Given the inherent…

Computer Vision and Pattern Recognition · Computer Science 2026-05-20 Halil Ibrahim Gulluk , Olivier Gevaert

Recently a number of studies demonstrated impressive performance on diverse vision-language multi-modal tasks such as image captioning and visual question answering by extending the BERT architecture with multi-modal pre-training…

Computer Vision and Pattern Recognition · Computer Science 2022-09-22 Jong Hak Moon , Hyungyung Lee , Woncheol Shin , Young-Hak Kim , Edward Choi

Histopathologic Images (HI) are the gold standard for evaluation of some tumors. However, the analysis of such images is challenging even for experienced pathologists, resulting in problems of inter and intra observer. Besides that, the…

Computer Vision and Pattern Recognition · Computer Science 2019-04-18 Jonathan de Matos , Alceu de Souza Britto , Luiz E. S. Oliveira , Alessandro L. Koerich

The integration of artificial intelligence into digital pathology has the potential to automate and improve various tasks, such as image analysis and diagnostic decision-making. Yet, the inherent variability of tissues, together with the…

Image and Video Processing · Electrical Eng. & Systems 2023-02-14 Ariel Larey , Nati Daniel , Eliel Aknin , Yael Fisher , Yonatan Savir

Recent advances in automated radiology report generation from chest X-rays using deep learning algorithms have the potential to significantly reduce the arduous workload of radiologists. However, due to the inherent massive data bias in…

Computer Vision and Pattern Recognition · Computer Science 2025-07-16 Zeyi Hou , Zeqiang Wei , Ruixin Yan , Ning Lang , Xiuzhuang Zhou

The development of vision-language models (VLMs) for histo-pathology has shown promising new usages and zero-shot performances. However, current approaches, which decompose large slides into smaller patches, focus solely on inductive…

Computer Vision and Pattern Recognition · Computer Science 2024-09-04 Maxime Zanella , Fereshteh Shakeri , Yunshi Huang , Houda Bahig , Ismail Ben Ayed

Recent studies showcase the competitive accuracy of Vision Transformers (ViTs) in relation to Convolutional Neural Networks (CNNs), along with their remarkable robustness. However, ViTs demand a large amount of data to achieve adequate…

Computer Vision and Pattern Recognition · Computer Science 2024-08-28 Sven Oehri , Nikolas Ebert , Ahmed Abdullah , Didier Stricker , Oliver Wasenmüller

Artificial intelligence (AI), machine learning, and deep learning (DL) methods are becoming increasingly important in the field of biomedical image analysis. However, to exploit the full potential of such methods, a representative number of…

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