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In recent studies on MRI reconstruction, advances have shown significant promise for further accelerating the MRI acquisition. Most state-of-the-art methods require a large amount of fully-sampled data to optimise reconstruction models,…

Image and Video Processing · Electrical Eng. & Systems 2023-12-04 Junwei Yang , Pietro Liò

Implicit neural representations have emerged as a powerful tool in learning 3D geometry, offering unparalleled advantages over conventional representations like mesh-based methods. A common type of INR implicitly encodes a shape's boundary…

Computer Vision and Pattern Recognition · Computer Science 2024-10-17 Shen Fan , Przemyslaw Musialski

In the advent of a digital health revolution, vast amounts of clinical data are being generated, stored and processed on a daily basis. This has made the storage and retrieval of large volumes of health-care data, especially,…

Computer Vision and Pattern Recognition · Computer Science 2019-05-10 Asif Shahriyar Sushmit , Shakib Uz Zaman , Ahmed Imtiaz Humayun , Taufiq Hasan , Mohammed Imamul Hassan Bhuiyan

Functional magnetic resonance imaging (fMRI) data is characterized by its complexity and high--dimensionality, encompassing signals from various regions of interests (ROIs) that exhibit intricate correlations. Analyzing fMRI data directly…

Applications · Statistics 2024-01-18 Yeseul Jeon , Jeong-Jae Kim , SuMin Yu , Junggu Choi , Sanghoon Han

With the growing computational power available for high-resolution ensemble simulations in scientific fields such as cosmology and oceanology, storage and computational demands present significant challenges. Current surrogate models fall…

Graphics · Computer Science 2025-04-22 Yi-Tang Chen , Haoyu Li , Neng Shi , Xihaier Luo , Wei Xu , Han-Wei Shen

In modern neuroscience, functional magnetic resonance imaging (fMRI) has been a crucial and irreplaceable tool that provides a non-invasive window into the dynamics of whole-brain activity. Nevertheless, fMRI is limited by hemodynamic…

Signal Processing · Electrical Eng. & Systems 2024-01-26 Yamin Li , Ange Lou , Ziyuan Xu , Shiyu Wang , Catie Chang

Recent advancements in local Implicit Neural Representation (INR) demonstrate its exceptional capability in handling images at various resolutions. However, frequency discrepancies between high-resolution (HR) and ground-truth images,…

Image and Video Processing · Electrical Eng. & Systems 2024-08-27 Meiyi Wei , Liu Xie , Ying Sun , Gang Chen

Understanding how the brain encodes external stimuli and how these stimuli can be decoded from the measured brain activities are long-standing and challenging questions in neuroscience. In this paper, we focus on reconstructing the complex…

Neurons and Cognition · Quantitative Biology 2022-10-05 Sikun Lin , Thomas Sprague , Ambuj K Singh

In this paper we present a fast and efficient method for the reconstruction of Magnetic Resonance Images (MRI) from severely under-sampled data. From the Compressed Sensing theory we have mathematically modeled the problem as a constrained…

Numerical Analysis · Computer Science 2017-12-01 Damiana Lazzaro , Elena Loli Piccolomini , Fabiana Zama

The scanning time for a fully sampled MRI can be undesirably lengthy. Compressed sensing has been developed to minimize image artifacts in accelerated scans, but the required iterative reconstruction is computationally complex and difficult…

Image and Video Processing · Electrical Eng. & Systems 2025-03-10 Di Xu , Hengjie Liu , Xin Miao , Daniel O'Connor , Jessica E. Scholey , Wensha Yang , Mary Feng , Michael Ohliger , Hui Lin , Dan Ruan , Yang Yang , Ke Sheng

Magnetic Resonance Fingerprinting (MRF) is a new approach to quantitative magnetic resonance imaging that allows simultaneous measurement of multiple tissue properties in a single, time-efficient acquisition. Standard MRF reconstructs…

Computer Vision and Pattern Recognition · Computer Science 2018-12-20 Ilkay Oksuz , Gastao Cruz , James Clough , Aurelien Bustin , Nicolo Fuin , Rene M. Botnar , Claudia Prieto , Andrew P. King , Julia A. Schnabel

Magnetic Resonance Imaging (MRI) requires a trade-off between resolution, signal-to-noise ratio, and scan time, making high-resolution (HR) acquisition challenging. Therefore, super-resolution for MR image is a feasible solution. However,…

Image and Video Processing · Electrical Eng. & Systems 2024-09-17 Weifeng Wei , Heng Chen , Pengxiang Su

Diffusion-weighted magnetic resonance imaging (DW-MRI) can be used to characterise the microstructure of the nervous tissue, e.g. to delineate brain white matter connections in a non-invasive manner via fibre tracking. Magnetic Resonance…

Functional magnetic resonance imaging (fMRI) technology is popularly used in many fields for studying how the brain reacts to mental stimuli. The identification of optimal fMRI experimental designs is crucial for rendering precise…

Statistics Theory · Mathematics 2015-10-30 Ching-Shui Cheng , Ming-Hung Kao

Despite the impressive advances achieved using deep learning for functional brain activity analysis, the heterogeneity of functional patterns and the scarcity of imaging data still pose challenges in tasks such as identifying neurological…

Image and Video Processing · Electrical Eng. & Systems 2025-05-30 Wenhui Cui , Haleh Akrami , Anand A. Joshi , Richard M. Leahy

Functional Magnetic Resonance Imaging (fMRI) captures the temporal dynamics of neural activity as a function of spatial location in the brain. Thus, fMRI scans are represented as 4-Dimensional (3-space + 1-time) tensors. And it is widely…

Computer Vision and Pattern Recognition · Computer Science 2020-02-17 Ahmed El-Gazzar , Mirjam Quaak , Leonardo Cerliani , Peter Bloem , Guido van Wingen , Rajat Mani Thomas

We propose a novel method to embed a functional magnetic resonance imaging (fMRI) dataset in a low-dimensional space. The embedding optimally preserves the local functional coupling between fMRI time series and provides a low-dimensional…

Machine Learning · Statistics 2008-01-16 Xilin Shen , François G. Meyer

We propose neural network layers that explicitly combine frequency and image feature representations and show that they can be used as a versatile building block for reconstruction from frequency space data. Our work is motivated by the…

Computer Vision and Pattern Recognition · Computer Science 2023-06-29 Nalini M. Singh , Juan Eugenio Iglesias , Elfar Adalsteinsson , Adrian V. Dalca , Polina Golland

Magnetic Resonance Imaging (MRI) is a non-invasive diagnostic and radiotherapy (RT) planning tool, offering detailed insights into the anatomy of the human body. The extensive scan time is stressful for patients, who must remain motionless…

Image and Video Processing · Electrical Eng. & Systems 2023-11-23 Shahinur Alam , Jinsoo Uh , Alexander Dresner , Chia-ho Hua , Khaled Khairy

Large-scale dense mapping is vital in robotics, digital twins, and virtual reality. Recently, implicit neural mapping has shown remarkable reconstruction quality. However, incremental large-scale mapping with implicit neural representations…

Robotics · Computer Science 2024-04-10 Jianheng Liu , Haoyao Chen