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We have developed a software package CALYPSO (Crystal structure AnaLYsis by Particle Swarm Optimization) to predict the energetically stable/metastable crystal structures of materials at given chemical compositions and external conditions…

Materials Science · Physics 2015-06-05 Yanchao Wang , Jian Lv , Li Zhu , Yanming Ma

We present SynRXN, a unified benchmarking framework and open-data resource for computer-aided synthesis planning (CASP). SynRXN decomposes end-to-end synthesis planning into five task families, covering reaction rebalancing, atom-to-atom…

Machine Learning · Computer Science 2026-04-21 Tieu-Long Phan , Nhu-Ngoc Nguyen Song , Peter F. Stadler

Python for Power System Analysis (PyPSA) is a free software toolbox for simulating and optimising modern electrical power systems over multiple periods. PyPSA includes models for conventional generators with unit commitment, variable…

Physics and Society · Physics 2018-01-18 Tom Brown , Jonas Hörsch , David Schlachtberger

Performance assessment is a key issue in the process of proposing new machine learning/statistical estimators. A possible method to complete such task is by using simulation studies, which can be defined as the procedure of estimating and…

Methodology · Statistics 2020-07-21 Marco H A Inácio

In recent times, quantum reservoir computing has emerged as a potential resource for time series prediction. Hence, there is a need for a flexible framework to test quantum circuits as nonlinear dynamical systems. We have developed a…

Quantum Physics · Physics 2024-01-22 Stanley Miao , Ola Tangen Kulseng , Alexander Stasik , Franz G. Fuchs

A large amount of data is produced every second from modern information systems such as mobile devices, the world wide web, Internet of Things, social media, etc. Analysis and mining of this massive data requires a lot of advanced tools and…

Machine Learning · Computer Science 2020-01-13 Rising Odegua , Festus Ikpotokin

QMetro++ is a Python package that provides a set of tools for identifying optimal estimation protocols that maximize quantum Fisher information (QFI). Optimization can be performed for arbitrary configurations of input states,…

Quantum Physics · Physics 2026-02-04 Piotr Dulian , Stanisław Kurdziałek , Rafał Demkowicz-Dobrzański

We introduce torchNTK, a python library to calculate the empirical neural tangent kernel (NTK) of neural network models in the PyTorch framework. We provide an efficient method to calculate the NTK of multilayer perceptrons. We compare the…

Machine Learning · Computer Science 2022-05-26 Andrew Engel , Zhichao Wang , Anand D. Sarwate , Sutanay Choudhury , Tony Chiang

In the last decade, temporal networks and static and temporal hypergraphs have enabled modelling connectivity and spreading processes in a wide array of real-world complex systems such as economic transactions, information spreading, brain…

Physics and Society · Physics 2023-12-05 Arash Badie-Modiri , Mikko Kivelä

The Python package pylimer-tools is a comprehensive toolkit for computational studies of polymer networks, particularly bead-spring networks. The package provides functionality to generate polymer networks using Monte Carlo (MC) procedures…

Soft Condensed Matter · Physics 2025-08-18 Tim Bernhard , Fabian Schwarz , Andrei A. Gusev

We introduce cilantro, an open-source C++ library for geometric and general-purpose point cloud data processing. The library provides functionality that covers low-level point cloud operations, spatial reasoning, various methods for point…

Computer Vision and Pattern Recognition · Computer Science 2018-11-19 Konstantinos Zampogiannis , Cornelia Fermuller , Yiannis Aloimonos

"PyTorch, Explain!" is a Python module integrating a variety of state-of-the-art approaches to provide logic explanations from neural networks. This package focuses on bringing these methods to non-specialists. It has minimal dependencies…

Machine Learning · Computer Science 2021-07-26 Pietro Barbiero , Gabriele Ciravegna , Dobrik Georgiev , Franscesco Giannini

Neutron multiplicity counting (NMC) underpins plutonium assay in nuclear safeguards, arms control, and disarmament verification, but existing simulation tools are essentially limited to MCNPX-PoliMi [1] (export-controlled, MCNP license…

Instrumentation and Detectors · Physics 2026-05-19 Christopher Fichtlscherer

Rigorous statistical methods for estimating thermonuclear reaction rates and nucleosynthesis are becoming increasingly established in nuclear astrophysics. The main challenge being faced is that experimental reaction rates are highly…

Nuclear Experiment · Physics 2015-06-22 Christian Iliadis , Richard Longland , Alain Coc , F. X. Timmes , Art E. Champagne

SchNetPack is a versatile neural networks toolbox that addresses both the requirements of method development and application of atomistic machine learning. Version 2.0 comes with an improved data pipeline, modules for equivariant neural…

Neutrino telescopes are gigaton-scale neutrino detectors comprised of individual light-detection units. Though constructed from simple building blocks, they have opened a new window to the Universe and are able to probe center-of-mass…

High Energy Physics - Experiment · Physics 2025-12-02 Jeffrey Lazar , Stephan Meighen-Berger , Christian Haack , David Kim , Santiago Giner , Carlos A. Argüelles

Pythonic Black-box Electronic Structure Tool (PyBEST) represents a fully-fledged modern electronic structure software package developed at Nicolaus Copernicus University in Toru\'n. The package provides an efficient and reliable platform…

PyTorch has ascended as a premier machine learning framework, yet it lacks a native and comprehensive library for decision and control tasks suitable for large development teams dealing with complex real-world data and environments. To…

Synchrotron processes, the radiative processes associated with the interaction of energetic charged particles with magnetic field, are of interest in many areas in astronomy, from the interstellar medium to extreme environments near compact…

Creating and maintaining computer readable geometries for use in Monte Carlo Radiation Transport (MCRT) simulations is an error-prone and time-consuming task. Simulating a system often requires geometry from different sources and modelling…

Computational Physics · Physics 2022-01-27 Stewart Boogert , Andrey Abramov , Laurence Nevay , William Shields , Stuart Walker