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Related papers: Adapting Segment Anything Model (SAM) through Prom…

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The Segment Anything Model (SAM) has recently gained popularity in the field of image segmentation due to its impressive capabilities in various segmentation tasks and its prompt-based interface. However, recent studies and individual…

Computer Vision and Pattern Recognition · Computer Science 2024-01-01 Junde Wu , Wei Ji , Yuanpei Liu , Huazhu Fu , Min Xu , Yanwu Xu , Yueming Jin

The Segment Anything Model (SAM) has recently demonstrated significant potential in medical image segmentation. Although SAM is primarily trained on 2D images, attempts have been made to apply it to 3D medical image segmentation. However,…

Computer Vision and Pattern Recognition · Computer Science 2025-11-25 Fangda Chen , Jintao Tang , Pancheng Wang , Ting Wang , Shasha Li , Ting Deng

The Segment Anything Model 2 (SAM2), a prompt-guided video foundation model, has remarkably performed in video object segmentation, drawing significant attention in the community. Due to the high similarity between camouflaged objects and…

Computer Vision and Pattern Recognition · Computer Science 2025-04-02 Xin Zhang , Keren Fu , Qijun Zhao

The emergence of large models, also known as foundation models, has brought significant advancements to AI research. One such model is Segment Anything (SAM), which is designed for image segmentation tasks. However, as with other foundation…

Computer Vision and Pattern Recognition · Computer Science 2023-05-03 Tianrun Chen , Lanyun Zhu , Chaotao Ding , Runlong Cao , Yan Wang , Zejian Li , Lingyun Sun , Papa Mao , Ying Zang

Cryo-electron microscopy (cryo-EM) has become a tool of fundamental importance in structural biology, helping us understand the basic building blocks of life. The algorithmic challenge of cryo-EM is to jointly estimate the unknown 3D poses…

Computer Vision and Pattern Recognition · Computer Science 2022-09-01 Axel Levy , Frédéric Poitevin , Julien Martel , Youssef Nashed , Ariana Peck , Nina Miolane , Daniel Ratner , Mike Dunne , Gordon Wetzstein

Foundation models have shown strong performance in multi-object segmentation with visual prompts, yet histopathology images remain challenging due to high cellular density, heterogeneity, and the gap between pixel-level supervision and…

Computer Vision and Pattern Recognition · Computer Science 2026-03-06 Yonghuang Wu , Wenwen Zeng , Xuan Xie , Chengqian Zhao , Guoqing Wu , Jinhua Yu

Cryo-electron microscopy (cryo-EM) enables single-particle analysis of biological macromolecules under strict low-dose imaging conditions, but the resulting micrographs often exhibit extremely low signal-to-noise ratios and weak particle…

Computer Vision and Pattern Recognition · Computer Science 2026-04-21 Xiaoqi Wu , Xueying Zhan , Wen Li , Junhao Wu , Xin Huang , Min Xu

The Segment Anything Model (SAM) achieves remarkable promptable segmentation given high-quality prompts which, however, often require good skills to specify. To make SAM robust to casual prompts, this paper presents the first comprehensive…

Computer Vision and Pattern Recognition · Computer Science 2023-12-06 Qi Fan , Xin Tao , Lei Ke , Mingqiao Ye , Yuan Zhang , Pengfei Wan , Zhongyuan Wang , Yu-Wing Tai , Chi-Keung Tang

Leveraging the extensive training data from SA-1B, the Segment Anything Model (SAM) demonstrates remarkable generalization and zero-shot capabilities. However, as a category-agnostic instance segmentation method, SAM heavily relies on prior…

Computer Vision and Pattern Recognition · Computer Science 2023-11-30 Keyan Chen , Chenyang Liu , Hao Chen , Haotian Zhang , Wenyuan Li , Zhengxia Zou , Zhenwei Shi

Segment anything model (SAM) has shown its spectacular performance in segmenting universal objects, especially when elaborate prompts are provided. However, the drawback of SAM is twofold. On the first hand, it fails to segment specific…

Computer Vision and Pattern Recognition · Computer Science 2023-11-16 Leiping Jie , Hui Zhang

Accurate myocardium segmentation across all phases in one cardiac cycle in cine cardiac magnetic resonance (CMR) scans is crucial for comprehensively cardiac function analysis. Despite advancements in deep learning (DL) for automatic cine…

Image and Video Processing · Electrical Eng. & Systems 2024-07-17 Zhennong Chen , Sekeun Kim , Hui Ren , Quanzheng Li , Xiang Li

This work proposes a novel approach beyond supervised learning for effective pathological image analysis, addressing the challenge of limited robust labeled data. Pathological diagnosis of diseases like cancer has conventionally relied on…

Computer Vision and Pattern Recognition · Computer Science 2024-10-23 Joonhyeon Song , Seohwan Yun , Seongho Yoon , Joohyeok Kim , Sangmin Lee

Foundation models like the segment anything model require high-quality manual prompts for medical image segmentation, which is time-consuming and requires expertise. SAM and its variants often fail to segment structures in ultrasound (US)…

Computer Vision and Pattern Recognition · Computer Science 2025-06-24 Assefa Seyoum Wahd , Banafshe Felfeliyan , Yuyue Zhou , Shrimanti Ghosh , Adam McArthur , Jiechen Zhang , Jacob L. Jaremko , Abhilash Hareendranathan

The recently introduced Segment Anything Model (SAM), a Visual Foundation Model (VFM), has demonstrated impressive capabilities in zero-shot segmentation tasks across diverse natural image datasets. Despite its success, SAM encounters…

Computer Vision and Pattern Recognition · Computer Science 2024-08-23 Chunpeng Zhou , Kangjie Ning , Qianqian Shen , Sheng Zhou , Zhi Yu , Haishuai Wang

The Segment Anything Model (SAM) has recently emerged as a significant breakthrough in foundation models, demonstrating remarkable zero-shot performance in object segmentation tasks. While SAM is designed for generalization, it exhibits…

Computer Vision and Pattern Recognition · Computer Science 2023-12-15 Josh Stein , Maxime Di Folco , Julia A. Schnabel

Cryo-electron microscopy (cryo-EM) has revolutionized structural biology by enabling near-atomic-level visualization of biomolecular assemblies. However, the exponential growth in cryo-EM data throughput and complexity, coupled with diverse…

Quantitative Methods · Quantitative Biology 2026-02-25 Weining Fu , Kai Shu , Kui Xu , Qiangfeng Cliff Zhang

Foundation segmentation models such as the Segment Anything Model (SAM) exhibit strong zero-shot generalization through large-scale pretraining, but adapting them to domain-specific semantic segmentation remains challenging, particularly…

Computer Vision and Pattern Recognition · Computer Science 2026-01-06 Salim Khazem

Determining the three-dimensional structure of proteins and protein complexes at atomic resolution is a fundamental task in structural biology. Over the last decade, remarkable progress has been made using "single particle" cryo-electron…

Numerical Analysis · Mathematics 2017-06-05 Alex Barnett , Leslie Greengard , Andras Pataki , Marina Spivak

Medical image registration is a fundamental task in medical image analysis, aiming to establish spatial correspondences between paired images. However, existing unsupervised deformable registration methods rely solely on intensity-based…

Computer Vision and Pattern Recognition · Computer Science 2025-02-18 Hao Xu , Tengfei Xue , Jianan Fan , Dongnan Liu , Yuqian Chen , Fan Zhang , Carl-Fredrik Westin , Ron Kikinis , Lauren J. O'Donnell , Weidong Cai

Although new vision foundation models such as Segment Anything Model 2 (SAM2) have significantly enhanced zero-shot image segmentation capabilities, reliance on human-provided prompts poses significant challenges in adapting SAM2 to medical…

Computer Vision and Pattern Recognition · Computer Science 2025-06-25 Yang Xing , Jiong Wu , Yuheng Bu , Kuang Gong
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