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Single-particle trajectories measured in microscopy experiments contain important information about dynamic processes undergoing in a range of materials including living cells and tissues. However, extracting that information is not a…

Quantitative Methods · Quantitative Biology 2019-09-25 Patrycja Kowalek , Hanna Loch-Olszewska , Janusz Szwabiński

Many theoretical treatments of transport in heterogeneous Darcy flows consider advection only. When local-scale dispersion is neglected, flux-weighting persists over time; mean Lagrangian and Eulerian flow velocity distributions relate…

Fluid Dynamics · Physics 2024-07-25 Lian Zhou , Scott K. Hansen

Diffusive transport is a universal phenomenon, throughout both biological and physical sciences, and models of diffusion are routinely used to interrogate diffusion-driven processes. However, most models neglect to take into account the…

Quantitative Methods · Quantitative Biology 2015-10-28 Paul R. Taylor , Christian A. Yates , Matthew J. Simpson , Ruth E. Baker

We present an efficient and robust numerical model for simulation of electrokinetic phenomena in porous networks over a wide range of applications including energy conversion, desalination, and lab-on-a-chip systems. Coupling between fluid…

Fluid Dynamics · Physics 2016-10-04 Shima Alizadeh , Ali Mani

Deep learning (DL) models for spatio-temporal traffic flow forecasting employ convolutional or graph-convolutional filters along with recurrent neural networks to capture spatial and temporal dependencies in traffic data. These models, such…

Machine Learning · Computer Science 2023-07-18 Agnimitra Sengupta , S. Ilgin Guler

Contraction metrics are crucial in control theory because they provide a powerful framework for analyzing stability, robustness, and convergence of various dynamical systems. However, identifying these metrics for complex nonlinear systems…

Optimization and Control · Mathematics 2025-04-25 Haoyu Li , Xiangru Zhong , Bin Hu , Huan Zhang

Motivated by the computational difficulties incurred by popular deep learning algorithms for the generative modeling of temporal densities, we propose a cheap alternative which requires minimal hyperparameter tuning and scales favorably to…

Machine Learning · Statistics 2023-10-13 Jonah Botvinick-Greenhouse , Yunan Yang , Romit Maulik

Convolutional Neural Networks (CNNs) are a standard approach for visual recognition due to their capacity to learn hierarchical representations from raw pixels. In practice, practitioners often choose among (i) training a compact custom CNN…

Computer Vision and Pattern Recognition · Computer Science 2026-01-06 Annoor Sharara Akhand

We developed analytical and numerical methods to study a transport of non-interacting particles in large networks consisting of M d-dimensional containers C_1,...,C_M with radii R_i linked together by tubes of length l_{ij} and radii a_{ij}…

Statistical Mechanics · Physics 2009-11-11 L. Lizana , Z. Konkoli

Recent endeavors aimed at forecasting future traffic flow states through deep learning encounter various challenges and yield diverse outcomes. A notable obstacle arises from the substantial data requirements of deep learning models, a…

Machine Learning · Computer Science 2024-04-02 Zhaohui Yang , Kshitij Jerath

Porous materials are widely used for applications in gas storage and separation. The diffusive properties of a variety of gases in porous media can be modeled using molecular dynamics simulations that can be computationally demanding…

Chemical Physics · Physics 2023-09-19 Gastón González , Rubén A. Fritz , Yamil J. Colón , Felipe Herrera

Many traffic prediction applications rely on uncertainty estimates instead of the mean prediction. Statistical traffic prediction literature has a complete subfield devoted to uncertainty modelling, but recent deep learning traffic…

Machine Learning · Computer Science 2020-12-10 Tijs Maas , Peter Bloem

Modeling effective transport properties of 3D porous media, such as permeability, at multiple scales is challenging as a result of the combined complexity of the pore structures and fluid physics - in particular, confinement effects which…

Homogenization method is used to analyse the equivalent behavior of transient flow of a passive solute through highly heterogeneous porous media. The flow is governed by a coupled system which includes an elliptic equation and a linear…

Mathematical Physics · Physics 2007-05-23 Brahim Amaziane , Alain Bourgeat , Mladen Jurak

Current theories of diffusiophoresis in porous media are limited to a porous medium saturated with a valence symmetric electrolyte. A predictive model for diffusiophoresis in porous media saturated with a valence asymmetric electrolyte, or…

Soft Condensed Matter · Physics 2024-12-03 Siddharth Sambamoorthy , Henry C. W. Chu

Understanding the generalization of deep neural networks is one of the most important tasks in deep learning. Although much progress has been made, theoretical error bounds still often behave disparately from empirical observations. In this…

Machine Learning · Computer Science 2021-11-09 Ching-Yao Chuang , Youssef Mroueh , Kristjan Greenewald , Antonio Torralba , Stefanie Jegelka

Persistence diagrams (PDs) are now routinely used to summarize the underlying topology of complex data. Despite several appealing properties, incorporating PDs in learning pipelines can be challenging because their natural geometry is not…

Machine Learning · Statistics 2018-11-14 Théo Lacombe , Marco Cuturi , Steve Oudot

We have developed an image-based convolutional neural network (CNN) that is applicable for quantitative time-resolved measurements of the fragmentation behavior of opaque brittle materials using ultra-high speed optical imaging. This model…

Materials Science · Physics 2024-07-19 Erwin Cazares , Brian E. Schuster

In this paper we propose the use of a continuous data assimilation algorithm for miscible flow models in a porous medium. In the absence of initial conditions for the model, observed sparse measurements are used to generate an approximation…

Numerical Analysis · Mathematics 2022-06-23 Hakima Bessaih , Victor Ginting , Bradley McCaskill

Understanding trajectory diversity is a fundamental aspect of addressing practical traffic tasks. However, capturing the diversity of trajectories presents challenges, particularly with traditional machine learning and recurrent neural…

Artificial Intelligence · Computer Science 2023-12-04 Ruyi Feng , Zhibin Li , Bowen Liu , Yan Ding
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