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DNA microarray gene-expression data has been widely used to identify cancerous gene signatures. Microarray can increase the accuracy of cancer diagnosis and prognosis. However, analyzing the large amount of gene expression data from…

Neural and Evolutionary Computing · Computer Science 2024-11-21 Maryam Eshraghi Evari , Md Nasir Sulaiman , Amir Rajabi Behjat

Accumulation of standardized data collections is opening up novel opportunities for holistic characterization of genome function. The limited scalability of current preprocessing techniques has, however, formed a bottleneck for full…

Quantitative Methods · Quantitative Biology 2013-04-09 Leo Lahti , Aurora Torrente , Laura L. Elo , Alvis Brazma , Johan Rung

Machine Learning methods have of late made significant efforts to solving multidisciplinary problems in the field of cancer classification using microarray gene expression data. Feature subset selection methods can play an important role in…

Computational Engineering, Finance, and Science · Computer Science 2013-03-04 G. Prat , Ll. Belanche

While variable selection is essential to optimize the learning complexity by prioritizing features, automating the selection process is preferred since it requires laborious efforts with intensive analysis otherwise. However, it is not an…

Machine Learning · Computer Science 2019-10-29 Makiya Nakashima , Alex Sim , Youngsoo Kim , Jonghyun Kim , Jinoh Kim

Cancer detection is one of the key research topics in the medical field. Accurate detection of different cancer types is valuable in providing better treatment facilities and risk minimization for patients. This paper deals with the…

Quantitative Methods · Quantitative Biology 2022-05-31 Yasamin Kowsari , Sanaz Nakhodchi , Davoud Gholamiangonabadi

The use of machine learning algorithms in finance, medicine, and criminal justice can deeply impact human lives. As a consequence, research into interpretable machine learning has rapidly grown in an attempt to better control and fix…

Machine Learning · Computer Science 2021-02-02 Thibaut Vidal , Toni Pacheco , Maximilian Schiffer

Microarray is a technology to quantitatively monitor the expression of large number of genes in parallel. It has become one of the main tools for global gene expression analysis in molecular biology research in recent years. The large…

Quantitative Methods · Quantitative Biology 2015-06-18 Min Xu

Data complexity analysis quantifies the hardness of constructing a predictive model on a given dataset. However, the effectiveness of existing data complexity measures can be challenged by the existence of irrelevant features and feature…

Computational Engineering, Finance, and Science · Computer Science 2023-08-15 Zhendong Sha , Li Zhu , Zijun Jiang , Yuanzhu Chen , Ting Hu

Recent advances in Earth Observation have focused on large-scale foundation models. However, these models are computationally expensive, limiting their accessibility and reuse for downstream tasks. In this work, we investigate compact…

Computer Vision and Pattern Recognition · Computer Science 2025-09-16 Mohanad Albughdadi

The adoption of probabilistic models for the best individuals found so far is a powerful approach for evolutionary computation. Increasingly more complex models have been used by estimation of distribution algorithms (EDAs), which often…

Neural and Evolutionary Computing · Computer Science 2007-10-16 Leonardo Emmendorfer , Aurora Pozo

This paper proposes an autoencoder (AE) that is used for improving the performance of once-class classifiers for the purpose of detecting anomalies. Traditional one-class classifiers (OCCs) perform poorly under certain conditions such as…

Machine Learning · Computer Science 2020-01-01 Kasra Babaei , ZhiYuan Chen , Tomas Maul

We present new methods for multilabel classification, relying on ensemble learning on a collection of random output graphs imposed on the multilabel and a kernel-based structured output learner as the base classifier. For ensemble learning,…

Machine Learning · Computer Science 2013-11-19 Hongyu Su , Juho Rousu

The image classification machine learning model was trained with the intention to predict the category of the input image. While multiple state-of-the-art ensemble model methodologies are openly available, this paper evaluates the…

Machine Learning · Computer Science 2020-10-19 W. H. Huang

Nowadays, many classification algorithms have been applied to various industries to help them work out their problems met in real-life scenarios. However, in many binary classification tasks, samples in the minority class only make up a…

Machine Learning · Computer Science 2022-08-23 Xiayu Liang , Ying Gao , Shanrong Xu

Microaggregation is a method to coarsen a dataset, by optimally clustering data points in groups of at least $k$ points, thereby providing a $k$-anonymity type disclosure guarantee for each point in the dataset. Previous algorithms for…

Data Structures and Algorithms · Computer Science 2024-01-05 Felix I. Stamm , Michael T. Schaub

Apriori is one of the key algorithms to generate frequent itemsets. Analyzing frequent itemset is a crucial step in analysing structured data and in finding association relationship between items. This stands as an elementary foundation to…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-12-20 Anjan K. Koundinya , Srinath N. K. , K. A. K. Sharma , Kiran Kumar , Madhu M. N. , Kiran U. Shanbag

In many modern applications, including analysis of gene expression and text documents, the data are noisy, high-dimensional, and unordered--with no particular meaning to the given order of the variables. Yet, successful learning is often…

Methodology · Statistics 2008-07-25 Ann B. Lee , Boaz Nadler , Larry Wasserman

A pruning-aware adaptive gradient method is proposed which classifies the variables in two sets before updating them using different strategies. This technique extends the ``relevant/irrelevant" approach of Ding (2019) and Zimmer et al.…

Optimization and Control · Mathematics 2025-02-13 Margherita Porcelli , Giovanni Seraghiti , Philippe L. Toint

Deep neural networks are behind many of the recent successes in machine learning applications. However, these models can produce overconfident decisions while encountering out-of-distribution (OOD) examples or making a wrong prediction.…

Machine Learning · Computer Science 2021-06-24 Navid Kardan , Ankit Sharma , Kenneth O. Stanley

The human gut microbiota is known to contribute to numerous physiological functions of the body and also implicated in a myriad of pathological conditions. Prolific research work in the past few decades have yielded valuable information…

Quantitative Methods · Quantitative Biology 2023-07-12 Isha Thombre , Pavan Kumar Perepu , Shyam Kumar Sudhakar