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One of the central goals in precision health is the understanding and interpretation of high-dimensional biological data to identify genes and markers associated with disease initiation, development, and outcomes. Though significant effort…

Quantitative Methods · Quantitative Biology 2020-09-18 Zhi Huang , Paul Salama , Wei Shao , Jie Zhang , Kun Huang

This article presents a novel approach to solving the sparsity-constrained Orthogonal Nonnegative Matrix Factorization (SCONMF) problem, which requires decomposing a non-negative data matrix into the product of two lower-rank non-negative…

Data Structures and Algorithms · Computer Science 2025-04-07 Salar Basiri , Alisina Bayati , Srinivasa Salapaka

The overfitting is one of the cursing subjects in the deep learning field. To solve this challenge, many approaches were proposed to regularize the learning models. They add some hyper-parameters to the model to extend the generalization;…

Machine Learning · Computer Science 2020-05-06 Mohammad Mahdi Bejani , Mehdi Ghatee

Traditional nonnegative matrix factorization (NMF) learns a new feature representation on the whole data space, which means treating all features equally. However, a subspace is often sufficient for accurate representation in practical…

Computer Vision and Pattern Recognition · Computer Science 2022-04-19 Junhang Li , Jiao Wei , Can Tong , Tingting Shen , Yuchen Liu , Chen Li , Shouliang Qi , Yudong Yao , Yueyang Teng

In this paper we propose a global optimization-based approach to jointly matching a set of images. The estimated correspondences simultaneously maximize pairwise feature affinities and cycle consistency across multiple images. Unlike…

Computer Vision and Pattern Recognition · Computer Science 2015-12-03 Xiaowei Zhou , Menglong Zhu , Kostas Daniilidis

Multiresolution analysis and matrix factorization are foundational tools in computer vision. In this work, we study the interface between these two distinct topics and obtain techniques to uncover hierarchical block structure in symmetric…

Computer Vision and Pattern Recognition · Computer Science 2017-05-17 Vamsi K. Ithapu , Risi Kondor , Sterling C. Johnson , Vikas Singh

Majorization-minimization algorithms consist of iteratively minimizing a majorizing surrogate of an objective function. Because of its simplicity and its wide applicability, this principle has been very popular in statistics and in signal…

Machine Learning · Statistics 2013-09-11 Julien Mairal

Square matrices appear in many machine learning problems and models. Optimization over a large square matrix is expensive in memory and in time. Therefore an economic approximation is needed. Conventional approximation approaches factorize…

Machine Learning · Computer Science 2021-09-20 Ruslan Khalitov , Tong Yu , Lei Cheng , Zhirong Yang

The problem of finding overlapping communities in networks has gained much attention recently. Optimization-based approaches use non-negative matrix factorization (NMF) or variants, but the global optimum cannot be provably attained in…

Machine Learning · Statistics 2017-06-26 Xueyu Mao , Purnamrita Sarkar , Deepayan Chakrabarti

Domain adaptation is an essential task in transfer learning to leverage data in one domain to bolster learning in another domain. In this paper, we present a new semi-supervised manifold alignment technique based on a two-step approach of…

Machine Learning · Computer Science 2020-11-12 Stefan Dernbach , Don Towsley

We address the problem of efficient sparse fixed-rank (S-FR) matrix decomposition, i.e., splitting a corrupted matrix $M$ into an uncorrupted matrix $L$ of rank $r$ and a sparse matrix of outliers $S$. Fixed-rank constraints are usually…

Computer Vision and Pattern Recognition · Computer Science 2015-03-26 German Ros , Julio Guerrero

Accurate and early prediction of a disease allows to plan and improve a patient's quality of future life. During pandemic situations, the medical decision becomes a speed challenge in which physicians have to act fast to diagnose and…

Machine Learning · Computer Science 2022-06-09 Pierluigi Costanzo , Kalia Orphanou

Nonnegative Matrix Factorization (NMF) was first introduced as a low-rank matrix approximation technique, and has enjoyed a wide area of applications. Although NMF does not seem related to the clustering problem at first, it was shown that…

Machine Learning · Statistics 2015-08-31 Ali Caner Türkmen

Affine matrix rank minimization problem is a fundamental problem with a lot of important applications in many fields. It is well known that this problem is combinatorial and NP-hard in general. In this paper, a continuous promoting low rank…

Optimization and Control · Mathematics 2017-05-02 Angang Cui , Jigen Peng , Haiyang Li , Chengyi Zhang , Yongchao Yu

Online Matrix Factorization (OMF) is a fundamental tool for dictionary learning problems, giving an approximate representation of complex data sets in terms of a reduced number of extracted features. Convergence guarantees for most of the…

Machine Learning · Computer Science 2020-11-10 Hanbaek Lyu , Deanna Needell , Laura Balzano

Nonnegative matrix factorization (NMF) often relies on the separability condition for tractable algorithm design. Separability-based NMF is mainly handled by two types of approaches, namely, greedy pursuit and convex programming. A notable…

Signal Processing · Electrical Eng. & Systems 2022-07-20 Tri Nguyen , Xiao Fu , Ruiyuan Wu

Nonnegative Matrix Factorization (NMF) is a widely used technique for data representation. Inspired by the expressive power of deep learning, several NMF variants equipped with deep architectures have been proposed. However, these methods…

Machine Learning · Computer Science 2017-11-21 Yuning Qiu , Guoxu Zhou , Kan Xie

Subsequence matching has appeared to be an ideal approach for solving many problems related to the fields of data mining and similarity retrieval. It has been shown that almost any data class (audio, image, biometrics, signals) is or can be…

Multimedia · Computer Science 2012-06-13 David Novak , Petr Volny , Pavel Zezula

How can we capture the hidden properties from a tensor and a matrix data simultaneously in a fast, accurate, and scalable way? Coupled matrix-tensor factorization (CMTF) is a major tool to extract latent factors from a tensor and matrices…

Numerical Analysis · Computer Science 2017-12-06 Dongjin Choi , Jun-Gi Jang , U Kang

We present Supervised Deep Multimodal Matrix Factorization (SD3MF), an interpretable framework for integrative brain network analysis that generalizes Symmetric Nonnegative Matrix Tri-Factorization (SNMTF) from unsupervised single-graph…

Machine Learning · Computer Science 2026-05-14 Amjad Seyedi , Lifang He , Songlin Zhao , Akwum Onwunta , Nicolas Gillis
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