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Graph convexity has been used as an important tool to better understand the structure of classes of graphs. Many studies are devoted to determine if a graph equipped with a convexity is a {\em convex geometry}. In this work we survey…

Discrete Mathematics · Computer Science 2024-09-05 Mitre C. Dourado , Marisa Gutierrez , Fábio Protti , Rudini Sampaio , Silvia Tondato

We introduce a homotopy theory of digraphs (directed graphs) and prove its basic properties, including the relations to the homology theory of digraphs constructed by the authors in previous papers. In particular, we prove the homotopy…

Algebraic Topology · Mathematics 2014-07-02 Alexander Grigor'yan , Yong Lin , Yuri Muranov , Shing-Tung Yau

We examine ordered graphs, defined as graphs with linearly ordered vertices, from the perspective of homomorphisms (and colorings) and their complexities. We demonstrate the corresponding computational and parameterized complexities, along…

Computational Complexity · Computer Science 2025-12-01 Michal Čertík , Andreas Emil Feldmann , Jaroslav Nešetřil , Paweł Rzążewski

Representing graphs by their homomorphism counts has led to the beautiful theory of homomorphism indistinguishability in recent years. Moreover, homomorphism counts have promising applications in database theory and machine learning, where…

Data Structures and Algorithms · Computer Science 2023-10-16 Jan Böker , Louis Härtel , Nina Runde , Tim Seppelt , Christoph Standke

The Graph Isomorphism problem has both theoretical and practical interest. In this paper we present an algorithm, called conauto-1.2, that efficiently tests whether two graphs are isomorphic, and finds an isomorphism if they are. This…

Data Structures and Algorithms · Computer Science 2011-06-23 Jose Luis Lopez-Presa , Antonio Fernandez Anta

The importance of studying properties of networks is manifest in diverse fields ranging from biology, engineering, physics, chemistry, neuroscience, and medicine. The functionality of networks with regard to performance, throughput,…

Molecular Networks · Quantitative Biology 2015-03-27 Allen Tannenbaum , Chris Sander , Liangjia Zhu , Romeil Sandhu , Ivan Kolesov , Eduard Reznik , Yasin Senbabaoglu , Tryphon Georgiou

The notion of homomorphism indistinguishability offers a combinatorial framework for characterizing equivalence relations of graphs, in particular equivalences in counting logics within finite model theory. That is, for certain graph…

Logic in Computer Science · Computer Science 2025-06-26 Georg Schindling

Graph theory is a branch of mathematics in which pair-wise relations between objects are studied. My PhD thesis, supervised by David R. Wood, introduces and investigates a new family of graphs, called link graphs, that generalises the…

Combinatorics · Mathematics 2014-05-27 Bin Jia

We discuss topological versions of the closed graph theorem, where continuity is inferred from near continuity in tandem with suitable conditions on source or target spaces. We seek internal characterizations of spaces satisfying a closed…

General Topology · Mathematics 2024-04-05 Dominikus Noll

Drawing principles, or aesthetics, are important in graph drawing. They are used as criteria for algorithm design and for quality evaluation. Current aesthetics are described as visual properties that a drawing is required to have to be…

Human-Computer Interaction · Computer Science 2016-09-27 Weidong Huang

The ability to control a complex network towards a desired behavior relies on our understanding of the complex nature of these social and technological networks. The existence of numerous control schemes in a network promotes us to wonder:…

Systems and Control · Computer Science 2016-12-01 Xizhe Zhang , Tianyang Lv , Yuanyuan Pu

Topological metrics of graphs provide a natural way to describe the prominent features of various types of networks. Graph metrics describe the structure and interplay of graph edges and have found applications in many scientific fields. In…

Data Structures and Algorithms · Computer Science 2018-06-21 Loukianos Spyrou , Javier Escudero

To a digraph with a choice of certain integral basis, we construct a CW complex, whose integral singular cohomology is canonically isomorphic to the path cohomology of the digraph as introduced in \cite{GLMY}. The homotopy type of the CW…

Combinatorics · Mathematics 2014-09-23 An Huang , Shing-Tung Yau

In real-world systems, the relationships and connections between components are highly complex. Real systems are often described as networks, where nodes represent objects in the system and edges represent relationships or connections…

Algebraic Topology · Mathematics 2024-06-24 Shen Zhang

The connection between contextuality and graph theory has led to many developments in the field. In particular, the sets of probability distributions in many contextuality scenarios can be described using well known convex sets from graph…

Quantum Physics · Physics 2017-09-19 Barbara Amaral , Marcelo Terra Cunha

A new family of graphs, {\it entangled networks}, with optimal properties in many respects, is introduced. By definition, their topology is such that optimizes synchronizability for many dynamical processes. These networks are shown to have…

Statistical Mechanics · Physics 2009-11-11 Luca Donetti , Pablo I. Hurtado , Miguel A. Munoz

The author's research of topologies of parallel computing systems and the tasks solved with them, including the corresponding tools of their modeling, is summarized in the present paper. The original topological model of such systems is…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-10-07 Victor A. Melent'ev

Graph link prediction (LP) plays a critical role in socially impactful applications, such as job recommendation and friendship formation. Ensuring fairness in this task is thus essential. While many fairness-aware methods manipulate graph…

Machine Learning · Computer Science 2026-02-13 Lilian Marey , Mathilde Perez , Tiphaine Viard , Charlotte Laclau

Graph theory provides a language for studying the structure of relations, and it is often used to study interactions over time too. However, it poorly captures the both temporal and structural nature of interactions, that calls for a…

Social and Information Networks · Computer Science 2017-10-12 Matthieu Latapy , Tiphaine Viard , Clémence Magnien

Retrieving cohesive subgraphs in networks is a fundamental problem in social network analysis and graph data management. These subgraphs can be used for marketing strategies or recommendation systems. Despite the introduction of numerous…

Social and Information Networks · Computer Science 2025-07-16 Dahee Kim , Song Kim , Jeongseon Kim , Junghoon Kim , Kaiyu Feng , Sungsu Lim , Jungeun Kim