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The "pre-training then fine-tuning (FT)" paradigm is widely adopted to boost the model performance of deep learning-based methods for medical volumetric segmentation. However, conventional full FT incurs high computational and memory costs.…

Computer Vision and Pattern Recognition · Computer Science 2024-05-29 Jiachen Shen , Wenxuan Wang , Chen Chen , Jianbo Jiao , Jing Liu , Yan Zhang , Shanshan Song , Jiangyun Li

In real world clinical environments, training and applying deep learning models on multi-modal medical imaging data often struggles with partially incomplete data. Standard approaches either discard missing samples, require imputation or…

Computer Vision and Pattern Recognition · Computer Science 2025-09-16 Christoph Fürböck , Paul Weiser , Branko Mitic , Philipp Seeböck , Thomas Helbich , Georg Langs

The pre-training and fine-tuning paradigm has become prominent in transfer learning. For example, if the model is pre-trained on ImageNet and then fine-tuned to PASCAL, it can significantly outperform that trained on PASCAL from scratch.…

Image and Video Processing · Electrical Eng. & Systems 2025-01-22 Wenxuan Li , Alan Yuille , Zongwei Zhou

Pre-trained models, e.g., from ImageNet, have proven to be effective in boosting the performance of many downstream applications. It is too demanding to acquire large-scale annotations to build such models for medical imaging. Meanwhile,…

Computer Vision and Pattern Recognition · Computer Science 2021-03-31 Xiaosong Wang , Ziyue Xu , Leo Tam , Dong Yang , Daguang Xu

Almost all the state-of-the-art neural networks for computer vision tasks are trained by (1) pre-training on a large-scale dataset and (2) finetuning on the target dataset. This strategy helps reduce dependence on the target dataset and…

Computer Vision and Pattern Recognition · Computer Science 2021-11-22 Shuvam Chakraborty , Burak Uzkent , Kumar Ayush , Kumar Tanmay , Evan Sheehan , Stefano Ermon

Foundation models have emerged as a powerful tool for many AI problems. Despite the tremendous success of foundation models, effective adaptation to new tasks, particularly those with limited labels, remains an open question and lacks…

Machine Learning · Computer Science 2024-02-26 Zhuoyan Xu , Zhenmei Shi , Junyi Wei , Fangzhou Mu , Yin Li , Yingyu Liang

Medical image segmentation is crucial for disease diagnosis and treatment planning, yet developing robust segmentation models often requires substantial computational resources and large datasets. Existing research shows that pre-trained…

Computer Vision and Pattern Recognition · Computer Science 2025-08-05 Paul Zaha , Lars Böcking , Simeon Allmendinger , Leopold Müller , Niklas Kühl

With access to large-scale, unlabeled medical datasets, researchers are confronted with two questions: Should they attempt to pretrain a custom foundation model on this medical data, or use transfer-learning from an existing generalist…

Computer Vision and Pattern Recognition · Computer Science 2025-06-25 Jakob Ambsdorf , Asbjørn Munk , Sebastian Llambias , Anders Nymark Christensen , Kamil Mikolaj , Randall Balestriero , Martin Tolsgaard , Aasa Feragen , Mads Nielsen

Pretrained foundation models offer substantial benefits for a wide range of downstream tasks, which can be one of the most potential techniques to access artificial general intelligence. However, scaling up foundation transformers for…

Machine Learning · Computer Science 2024-06-21 Xingrun Xing , Li Du , Xinyuan Wang , Xianlin Zeng , Yequan Wang , Zheng Zhang , Jiajun Zhang

Traditional spatiotemporal models generally rely on task-specific architectures, which limit their generalizability and scalability across diverse tasks due to domain-specific design requirements. In this paper, we introduce…

Computer Vision and Pattern Recognition · Computer Science 2025-03-27 Chen Tang , Xinzhu Ma , Encheng Su , Xiufeng Song , Xiaohong Liu , Wei-Hong Li , Lei Bai , Wanli Ouyang , Xiangyu Yue

Free Point Transformer (FPT) has been proposed as a data-driven, non-rigid point set registration approach using deep neural networks. As FPT does not assume constraints based on point vicinity or correspondence, it may be trained simply…

Computer Vision and Pattern Recognition · Computer Science 2022-07-25 Zachary MC Baum , Tamas Ungi , Christopher Schlenger , Yipeng Hu , Dean C Barratt

Single-task models have proven pivotal in solving specific tasks; however, they have limitations in real-world applications where multi-tasking is necessary and domain shifts are exhibited. Recently, instructional prompts have shown…

Computation and Language · Computer Science 2022-04-19 Mihir Parmar , Swaroop Mishra , Mirali Purohit , Man Luo , M. Hassan Murad , Chitta Baral

Training a neural network-based biomedical named entity recognition (BioNER) model usually requires extensive and costly human annotations. While several studies have employed multi-task learning with multiple BioNER datasets to reduce…

Computation and Language · Computer Science 2024-12-31 Yu Yin , Hyunjae Kim , Xiao Xiao , Chih Hsuan Wei , Jaewoo Kang , Zhiyong Lu , Hua Xu , Meng Fang , Qingyu Chen

Following its success for vision and text, the "foundation model" (FM) paradigm -- pretraining large models on massive data, then fine-tuning on target tasks -- has rapidly expanded to domains in the sciences, engineering, healthcare, and…

Machine Learning · Computer Science 2025-03-24 Zongzhe Xu , Ritvik Gupta , Wenduo Cheng , Alexander Shen , Junhong Shen , Ameet Talwalkar , Mikhail Khodak

Biometric capture devices have been utilised to estimate a person's alertness through near-infrared iris images, expanding their use beyond just biometric recognition. However, capturing a substantial number of corresponding images related…

Computer Vision and Pattern Recognition · Computer Science 2025-07-29 Juan E. Tapia , Christoph Busch

Disparate areas of machine learning have benefited from models that can take raw data with little preprocessing as input and learn rich representations of that raw data in order to perform well on a given prediction task. We evaluate this…

Machine Learning · Computer Science 2016-09-22 Narges Razavian , Jake Marcus , David Sontag

Foundation models have significantly advanced medical image analysis through the pre-train fine-tune paradigm. Among various fine-tuning algorithms, Parameter-Efficient Fine-Tuning (PEFT) is increasingly utilized for knowledge transfer…

Computer Vision and Pattern Recognition · Computer Science 2024-06-11 Raman Dutt , Linus Ericsson , Pedro Sanchez , Sotirios A. Tsaftaris , Timothy Hospedales

Large pretrained visual foundation models exhibit impressive general capabilities. However, the extensive prior knowledge inherent in these models can sometimes be a double-edged sword when adapting them to downstream tasks in specific…

Computer Vision and Pattern Recognition · Computer Science 2025-03-24 Qinghe Ma , Jian Zhang , Zekun Li , Lei Qi , Qian Yu , Yinghuan Shi

Deep learning has transformed computer vision but relies heavily on large labeled datasets and computational resources. Transfer learning, particularly fine-tuning pretrained models, offers a practical alternative; however, models…

Computer Vision and Pattern Recognition · Computer Science 2025-05-23 Iván Matas , Carmen Serrano , Miguel Nogales , David Moreno , Lara Ferrándiz , Teresa Ojeda , Begoña Acha

Universal medical image segmentation models have emerged as a promising paradigm due to their strong generalizability across diverse tasks, showing great potential for a wide range of clinical applications. This potential has been partly…

Computer Vision and Pattern Recognition · Computer Science 2025-08-18 Yanwu Yang , Guinan Su , Jiesi Hu , Francesco Sammarco , Jonas Geiping , Thomas Wolfers
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