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Data storage in DNA is developing as a possible solution for archival digital data. Recently, to further increase the potential capacity of DNA-based data storage systems, the combinatorial composite DNA synthesis method was suggested. This…

Information Theory · Computer Science 2024-05-28 Omer Sabary , Inbal Preuss , Ryan Gabrys , Zohar Yakhini , Leon Anavy , Eitan Yaakobi

With the continued improvement of sequencing technologies, the prospect of genome-based medicine is now at the forefront of scientific research. To realize this potential, however, we need a revolutionary sequencing method for the…

Biological Physics · Physics 2008-01-03 Michael Zwolak , Massimiliano Di Ventra

In this paper, we propose a mechanism for storing complex patterns within a neural network and subsequently recalling them. This model is based on our work published in 2018(Inazawa, 2018), which we have refined and extended in this work.…

Neural and Evolutionary Computing · Computer Science 2025-04-10 Hiroshi Inazawa

Molecular Communication (MC) is a communication strategy that uses molecules as carriers of information, and is widely used by biological cells. As an interdisciplinary topic, it has been studied by biologists, communication theorists and a…

Information Theory · Computer Science 2016-12-13 Amin Gohari , Mahtab Mirmohseni , Masoumeh Nasiri-Kenari

We address the use of maximum distance separable (MDS) codes for distributed storage (DS) to enable efficient content delivery in wireless networks. Content is stored in a number of the mobile devices and can be retrieved from them using…

Information Theory · Computer Science 2016-08-30 Amina Piemontese , Alexandre Graell i Amat

Neural networks based on soft and biological matter constitute an interesting potential alternative to traditional implementations based on electric circuits. DNA is a particularly promising system in this context due its natural ability to…

Biological Physics · Physics 2026-01-22 Michael te Vrugt

The influence of decoherence and bonding on the linear conductance of single double-stranded DNA molecules is examined by fitting a phenomenological statistical model developed recently (EPJB {\bf 68}, 237 (2009)) to experimental results.…

Soft Condensed Matter · Physics 2010-09-30 M. Zilly , O. Ujsaghy , D. E. Wolf

Probe-based data storage attracted many researchers from academia and industry, resulting in unprecendeted high data-density demonstrations. This topical review gives a comprehensive overview of the main contributions that led to the major…

Instrumentation and Detectors · Physics 2015-11-30 Wabe W. Koelmans , Johan B. C. Engelen , L. Abelmann

To store information at extremely high-density and data-rate, we propose to adapt, integrate, and extend the techniques developed by chemists and molecular biologists for the purpose of manipulating biological and other macromolecules. In…

Emerging Technologies · Computer Science 2017-08-29 M. Mansuripur , P. K. Khulbe , S. M. Kuebler , J. W. Perry , M. S. Giridhar , J. Kevin Erwin , Kibyung Seong , Seth Marder , N. Peyghambarian

Double-stranded DNA (dsDNA) has been established as an efficient medium for charge migration, bringing it to the forefront of the field of molecular electronics as well as biological research. The charge migration rate is controlled by the…

Soft Condensed Matter · Physics 2020-11-25 Abhishek Aggarwal , Vinayak , Saientan Bag , Chiranjib Bhattacharyya , Umesh V. Waghmare , Prabal K Maiti

Charge migration along DNA molecules has attracted scientific interest for over half a century. Reports on possible high rates of charge transfer between donor and acceptor through the DNA, obtained in the last decade from solution…

Materials Science · Physics 2009-11-10 Danny Porath , Gianaurelio Cuniberti , Rosa Di Felice

Multiple Description Coding (MDC) is a promising error-resilient source coding method that is particularly suitable for dynamic networks with multiple (yet noisy and unreliable) paths. However, conventional MDC video codecs suffer from…

Computer Vision and Pattern Recognition · Computer Science 2024-12-12 Xinyue Hu , Wei Ye , Jiaxiang Tang , Eman Ramadan , Zhi-Li Zhang

Important aspects of the process of information storage and retrieval in DNA and RNA, and its evolution, are the role of the anticodons and associated $t$RNA's, and correlations between anticodons and amino acids; the degeneracy of the…

Biological Physics · Physics 2007-05-23 P. D. Jarvis , J. D. Bashford

The formation of DNA loops by proteins and protein complexes that bind at distal DNA sites plays a central role in many cellular processes, such as transcription, recombination, and replication. Here we review the basic thermodynamic…

Molecular Networks · Quantitative Biology 2007-05-23 Jose M. G. Vilar , Leonor Saiz

As long as human beings exist on this earth, there will be confidential images intended for limited audience. These images have to be transmitted in such a way that no unauthorized person gets knowledge of them. DNA sequences play a vital…

Cryptography and Security · Computer Science 2016-11-28 Grasha Jacob , A. Murugan

Recent developments in the Internet of Bio-Nano Things (IoBNT) are laying the groundwork for innovative applications across the healthcare sector. Nanodevices designed to operate within the body, managed remotely via the internet, are…

Molecular communication promises to enable communication between nanomachines with a view to increasing their functionalities and open up new possible applications. Due to some of the biological properties, bacteria have been proposed as a…

Emerging Technologies · Computer Science 2016-11-18 Monowar Hasan , Ekram Hossain , Sasitharan Balasubramaniam , Yevgeni Koucheryavy

Coded caching provides significant gains over conventional uncoded caching by creating multicasting opportunities among distinct requests. Massive multiple-input multiple-output (MIMO) systems require downlink channel state information…

Information Theory · Computer Science 2019-07-08 Qianqian Yang , Mahdi Boloursaz Mashhadi , Deniz Gündüz

With much advancement in the field of nanotechnology, bioengineering and synthetic biology over the past decade, microscales and nanoscales devices are becoming a reality. Yet the problem of engineering a reliable communication system…

Emerging Technologies · Computer Science 2016-11-15 Nariman Farsad , H. Birkan Yilmaz , Andrew Eckford , Chan-Byoung Chae , Weisi Guo

In this paper, we examine the problem of information storage on memristors affected by resistive drift noise under energy constraints. We introduce a novel, fundamental trade-off between the information lifetime of memristive states and the…

Emerging Technologies · Computer Science 2025-01-22 Waleed El-Geresy , Christos Papavassiliou , Deniz Gündüz