Related papers: CellPhoneDB v5: inferring cell-cell communication …
Fifth-generation (5G) cellular networks promise higher data rates, lower latency, and large numbers of interconnected devices. Thereby, 5G will provide important steps towards unlocking the full potential of the Internet of Things (IoT). In…
Cellular network resources are essential to be optimized in Femto cells equipped macro cell networks. This is achieved by increasing the cellular coverage and channel capacity, and reducing power usage and interference between femto cells…
Cell type annotation is a critical yet laborious step in single-cell RNA sequencing analysis. We present a trustworthy large language model (LLM)-agent, CellTypeAgent, which integrates LLMs with verification from relevant databases.…
Numerical investigation of the interaction of electromagnetic fields with eukaryotic cells requires specifically adapted computer models. Virtual microdosimetry, used to investigate exposure, requires volumetric cell models, which are…
Modeling the dynamics of cellular differentiation is fundamental to advancing the understanding and treatment of diseases associated with this process, such as cancer. With the rapid growth of single-cell datasets, this has also become a…
This paper presents a framework that enables characterizing analytically the spectral efficiency achievable by D2D (device-to-device) communication integrated with a cellular network. This framework is based on a stochastic geometry…
Learning phone types from phone instances has been a long-standing problem, while still being open. In this work, we revisit this problem in the context of self-supervised learning, and pose it as the problem of matching cluster centroids…
The rapid growth of AI for Science (AI4S) has underscored the significance of scientific datasets, leading to the establishment of numerous national scientific data centers and sharing platforms. Despite this progress, efficiently promoting…
For over two decades, image-based profiling has revolutionized cell phenotype analysis. Image-based profiling processes rich, high-throughput, microscopy data into thousands of unbiased measurements that reveal phenotypic patterns powerful…
We introduce MemoriesDB, a unified data architecture designed to avoid decoherence across time, meaning, and relation in long-term computational memory. Each memory is a time-semantic-relational entity-a structure that simultaneously…
Cell tracking and segmentation assist biologists in extracting insights from large-scale microscopy time-lapse data. Driven by local accuracy metrics, current tracking approaches often suffer from a lack of long-term consistency and the…
Gene co-expression databases in model plants such as Arabidopsis and rice have been extensively developed and utilised for predicting gene function and identifying functional modules for underlying biological processes. However, such tools…
Both action potentials and mechanosensitive signalling are an important communication mechanisms in plants. Considering an information theoretic framework, this paper explores the effective range of multiple action potentials for a long…
CellProfiler is a widely used software for creating reproducible, reusable image analysis workflows without needing to code. In addition to the >90 modules that make up the main CellProfiler program, CellProfiler has a plugins system that…
The emergence and growing popularity of multimodal large language models (MLLMs) have significant potential to enhance various aspects of daily life, from improving communication to facilitating learning and problem-solving. Mobile phones,…
Cells are constantly exposed to fluctuating environmental conditions. External signals are sensed, processed and integrated by cellular signal transduction networks, which translate input signals into specific cellular responses by means of…
Developing and maintaining complex, large-scale, product line of highly customized software systems is difficult and costly. Part of the difficulty is due to the need to communicate business knowledge between domain experts and application…
The inclusion of the sensing functionality in the coming generations of cellular networks necessitates a rethink of dense cell deployments. In this paper, we analyze and optimize dense cell topologies for dual-functional radar-communication…
Biological cells, by definition, are the basic units which contain the fundamental molecules of life of which all living things are composed. Understanding how they function and differentiating cells from one another therefore is of…
The simulation of morphogenetic problems requires the simultaneous and coupled simulation of signalling and tissue dynamics. A cellular resolution of the tissue domain is important to adequately describe the impact of cell-based events,…