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We present HARP, a novel method for learning low dimensional embeddings of a graph's nodes which preserves higher-order structural features. Our proposed method achieves this by compressing the input graph prior to embedding it, effectively…

Social and Information Networks · Computer Science 2017-11-17 Haochen Chen , Bryan Perozzi , Yifan Hu , Steven Skiena

Network embedding (NE) is playing a principal role in network mining, due to its ability to map nodes into efficient low-dimensional embedding vectors. However, two major limitations exist in state-of-the-art NE methods: role preservation…

Social and Information Networks · Computer Science 2020-10-01 Yulong Pei , Xin Du , Jianpeng Zhang , George Fletcher , Mykola Pechenizkiy

Source code representations are key in applying machine learning techniques for processing and analyzing programs. A popular approach in representing source code is neural source code embeddings that represents programs with…

Machine Learning · Computer Science 2022-06-17 Md Rafiqul Islam Rabin , Arjun Mukherjee , Omprakash Gnawali , Mohammad Amin Alipour

Network embedding is a fervid topic in current networks science and observes that most real complex systems can be embedded in hidden metrics space and emerge as the geometrical property, where the geometric distance between nodes…

Physics and Society · Physics 2020-04-28 Zongning Wu , Zengru Di , Ying Fan

Long non-coding RNA, microRNA, and messenger RNA enable key regulations of various biological processes through a variety of diverse interaction mechanisms. Identifying the interactions and cross-talk between these heterogeneous RNA classes…

Molecular Networks · Quantitative Biology 2020-12-10 Nhat Tran , Jean Gao

GNNs are widely used to solve various tasks including node classification and link prediction. Most of the GNN architectures assume the initial embedding to be random or generated from popular distributions. These initial embeddings require…

Machine Learning · Computer Science 2024-01-31 Shraban Kumar Chatterjee , Suman Kundu

In recent years, graph representation learning has gained significant popularity, which aims to generate node embeddings that capture features of graphs. One of the methods to achieve this is employing a technique called random walks that…

Machine Learning · Computer Science 2022-10-13 Deniz Gurevin , Mohsin Shan , Tong Geng , Weiwen Jiang , Caiwen Ding , Omer Khan

Network embedding is an effective technique to learn the low-dimensional representations of nodes in networks. Real-world networks are usually with multiplex or having multi-view representations from different relations. Recently, there has…

Machine Learning · Computer Science 2022-03-08 Qifan Wang , Yi Fang , Anirudh Ravula , Ruining He , Bin Shen , Jingang Wang , Xiaojun Quan , Dongfang Liu

Representation learning on networks offers a powerful alternative to the oft painstaking process of manual feature engineering, and as a result, has enjoyed considerable success in recent years. However, all the existing representation…

Machine Learning · Computer Science 2026-05-19 Mandana Saebi , Giovanni Luca Ciampaglia , Lance M Kaplan , Nitesh V Chawla

Network embedding which encodes all vertices in a network as a set of numerical vectors in accordance with it's local and global structures, has drawn widespread attention. Network embedding not only learns significant features of a…

Physics and Society · Physics 2017-04-20 Weiwei Gu , Li Gong , Xiandao Lou , Jiang Zhang

Many real-world graphs involve different types of nodes and relations between nodes, being heterogeneous by nature. The representation learning of heterogeneous graphs (HGs) embeds the rich structure and semantics of such graphs into a…

Machine Learning · Computer Science 2021-09-16 Costas Mavromatis , George Karypis

Recent advances in the field of network representation learning are mostly attributed to the application of the skip-gram model in the context of graphs. State-of-the-art analogues of skip-gram model in graphs define a notion of…

Social and Information Networks · Computer Science 2018-07-11 Soumya Sarkar , Aditya Bhagwat , Animesh Mukherjee

We propose a learning framework to find the representation of a robot's kinematic structure and motion embedding spaces using graph neural networks (GNN). Finding a compact and low-dimensional embedding space for complex phenomena is a key…

Robotics · Computer Science 2023-02-01 J. Taery Kim , Jeongeun Park , Sungjoon Choi , Sehoon Ha

Network representation learning (NRL) methods aim to map each vertex into a low dimensional space by preserving the local and global structure of a given network, and in recent years they have received a significant attention thanks to…

Machine Learning · Computer Science 2018-10-17 Abdulkadir Çelikkanat , Fragkiskos D. Malliaros

The study of neural representations, both in biological and artificial systems, is increasingly revealing the importance of geometric and topological structures. Inspired by this, we introduce Event2Vec, a novel framework for learning…

Machine Learning · Computer Science 2025-12-02 Antonin Sulc

We present path2vec, a new approach for learning graph embeddings that relies on structural measures of pairwise node similarities. The model learns representations for nodes in a dense space that approximate a given user-defined graph…

Computation and Language · Computer Science 2019-04-15 Andrey Kutuzov , Mohammad Dorgham , Oleksiy Oliynyk , Chris Biemann , Alexander Panchenko

This tutorial covers a few recent papers in the field of network embedding. Network embedding is a collective term for techniques for mapping graph nodes to vectors of real numbers in a multidimensional space. To be useful, a good embedding…

Social and Information Networks · Computer Science 2019-10-17 Boaz Shmueli

Networks with nodes embedded in a metric space have gained increasing interest in recent years. The effects of spatial embedding on the networks' structural characteristics, however, are rarely taken into account when studying their…

Physics and Society · Physics 2016-07-06 Marc Wiedermann , Jonathan F. Donges , Jürgen Kurths , Reik V. Donner

In this paper, we focus on learning low-dimensional embeddings for nodes in graph-structured data. To achieve this, we propose Caps2NE -- a new unsupervised embedding model leveraging a network of two capsule layers. Caps2NE induces a…

Machine Learning · Computer Science 2020-08-19 Dai Quoc Nguyen , Tu Dinh Nguyen , Dat Quoc Nguyen , Dinh Phung

Representation learning methods for heterogeneous networks produce a low-dimensional vector embedding for each node that is typically fixed for all tasks involving the node. Many of the existing methods focus on obtaining a static vector…

Machine Learning · Computer Science 2021-04-28 Ping Wang , Khushbu Agarwal , Colby Ham , Sutanay Choudhury , Chandan K. Reddy