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The most widely used technology to identify the proteins present in a complex biological sample is tandem mass spectrometry, which quickly produces a large collection of spectra representative of the peptides (i.e., protein subsequences)…

Quantitative Methods · Quantitative Biology 2019-09-06 John T. Halloran , David M. Rocke

Statistical shape modeling (SSM) directly from 3D medical images is an underutilized tool for detecting pathology, diagnosing disease, and conducting population-level morphology analysis. Deep learning frameworks have increased the…

Computer Vision and Pattern Recognition · Computer Science 2022-05-17 Jadie Adams , Shireen Elhabian

The goal of this paper is to design image classification systems that, after an initial multi-task training phase, can automatically adapt to new tasks encountered at test time. We introduce a conditional neural process based approach to…

Machine Learning · Statistics 2020-07-14 James Requeima , Jonathan Gordon , John Bronskill , Sebastian Nowozin , Richard E. Turner

Converging evidence suggests that the mammalian ventral visual pathway encodes increasingly complex stimulus features in downstream areas. Using deep convolutional neural networks, we can now quantitatively demonstrate that there is indeed…

Neurons and Cognition · Quantitative Biology 2017-03-13 Umut Güçlü , Marcel A. J. van Gerven

The rapid development of autonomous vehicles (AVs) holds vast potential for transportation systems through improved safety, efficiency, and access to mobility. However, the progression of these impacts, as AVs are adopted, is not well…

Artificial Intelligence · Computer Science 2022-01-03 Cathy Wu , Aboudy Kreidieh , Kanaad Parvate , Eugene Vinitsky , Alexandre M Bayen

Deep latent variable models have achieved significant empirical successes in model-based reinforcement learning (RL) due to their expressiveness in modeling complex transition dynamics. On the other hand, it remains unclear theoretically…

Machine Learning · Computer Science 2023-03-08 Tongzheng Ren , Chenjun Xiao , Tianjun Zhang , Na Li , Zhaoran Wang , Sujay Sanghavi , Dale Schuurmans , Bo Dai

Features play a crucial role in computer vision. Initially designed to detect salient elements by means of handcrafted algorithms, features are now often learned by different layers in Convolutional Neural Networks (CNNs). This paper…

Computer Vision and Pattern Recognition · Computer Science 2021-11-18 Loris Nanni , Stefano Ghidoni , Sheryl Brahnam

Compactly representing the visual signals is of fundamental importance in various image/video-centered applications. Although numerous approaches were developed for improving the image and video coding performance by removing the…

Image and Video Processing · Electrical Eng. & Systems 2020-08-14 Rongqun Lin , Linwei Zhu , Shiqi Wang , Sam Kwong

Graph Learning (GL) is at the core of inference and analysis of connections in data mining and machine learning (ML). By observing a dataset of graph signals, and considering specific assumptions, Graph Signal Processing (GSP) tools can…

Machine Learning · Computer Science 2022-11-08 Aref Einizade , Sepideh Hajipour Sardouie

This paper addresses a fundamental problem of scene understanding: How to parse the scene image into a structured configuration (i.e., a semantic object hierarchy with object interaction relations) that finely accords with human perception.…

Computer Vision and Pattern Recognition · Computer Science 2018-03-01 Liang Lin , Guangrun Wang , Rui Zhang , Ruimao Zhang , Xiaodan Liang , Wangmeng Zuo

Controlling polymorphism in molecular crystals is crucial in the pharmaceutical, dye, and pesticide industries. However, its theoretical description is extremely challenging, due to the associated long timescales ($ > 1 \, \mu s$). We…

Chemical Physics · Physics 2023-02-09 Oren Elishav , Roy Podgaetsky , Olga Meikler , Barak Hirshberg

As urban environments manifest high levels of complexity it is of vital importance that safety systems embedded within autonomous vehicles (AVs) are able to accurately anticipate short-term future motion of nearby agents. This problem can…

Computer Vision and Pattern Recognition · Computer Science 2021-03-29 Albert Dulian , John C. Murray

The ISOKANN (Invariant Subspaces of Koopman Operators Learned by Artificial Neural Networks) framework provides a data-driven route to extract collective variables (CVs) and effective dynamics from complex molecular systems. In this work,…

Dynamical Systems · Mathematics 2026-04-08 Alexander Sikorski , Luca Donati , Marcus Weber , Christof Schütte

In this paper, we propose a new sampling strategy for hyperspectral signals that is based on dictionary learning and singular value decomposition (SVD). Specifically, we first learn a sparsifying dictionary from training spectral data using…

Computer Vision and Pattern Recognition · Computer Science 2015-12-04 Mingrui Yang , Frank de Hoog , Yuqi Fan , Wen Hu

Volumetric image segmentation with convolutional neural networks (CNNs) encounters several challenges, which are specific to medical images. Among these challenges are large volumes of interest, high class imbalances, and difficulties in…

Computer Vision and Pattern Recognition · Computer Science 2019-11-12 Fabian Balsiger , Yannick Soom , Olivier Scheidegger , Mauricio Reyes

Complex-valued neural networks (CVNNs) are nonlinear filters used in the digital signal processing of complex-domain data. Compared with real-valued neural networks~(RVNNs), CVNNs can directly handle complex-valued input and output signals…

Neural and Evolutionary Computing · Computer Science 2024-08-20 Kayol Soares Mayer , Jonathan Aguiar Soares , Ariadne Arrais Cruz , Dalton Soares Arantes

Path loss prediction is a beneficial tool for efficient use of the radio frequency spectrum. Building on prior research on high-resolution map-based path loss models, this paper studies convolutional neural network input representations in…

Machine Learning · Computer Science 2026-02-05 Ryan G. Dempsey , Jonathan Ethier , Halim Yanikomeroglu

Variational Auto-Encoders (VAEs) are capable of learning latent representations for high dimensional data. However, due to the i.i.d. assumption, VAEs only optimize the singleton variational distributions and fail to account for the…

Machine Learning · Computer Science 2020-04-20 Da Tang , Dawen Liang , Tony Jebara , Nicholas Ruozzi

Learning on evolving(dynamic) graphs has caught the attention of researchers as static methods exhibit limited performance in this setting. The existing methods for dynamic graphs learn spatial features by local neighborhood aggregation,…

Machine Learning · Computer Science 2022-11-23 Anson Bastos , Abhishek Nadgeri , Kuldeep Singh , Toyotaro Suzumura , Manish Singh

Transformer has been very successful in various computer vision tasks and understanding the working mechanism of transformer is important. As touchstones, weakly-supervised semantic segmentation (WSSS) and class activation map (CAM) are…

Computer Vision and Pattern Recognition · Computer Science 2026-03-26 Lianghui Zhu , Yingyue Li , Jiemin Fang , Yan Liu , Hao Xin , Wenyu Liu , Xinggang Wang