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In this paper, we study the problem of finding a minimum weight spanning tree that contains each vertex in a given subset $V_{\rm NT}$ of vertices as an internal vertex. This problem, called Minimum Weight Non-Terminal Spanning Tree,…

Data Structures and Algorithms · Computer Science 2025-01-30 Tesshu Hanaka , Yasuaki Kobayashi

For $t,g>0$, a vertex-weighted graph of total weight $W$ is $(t,g)$-trimmable if it contains a vertex-induced subgraph of total weight at least $(1-1/t)W$ and with no simple path of more than $g$ edges. A family of graphs is trimmable if…

Discrete Mathematics · Computer Science 2008-02-21 Thomas Erlebach , Torben Hagerup , Klaus Jansen , Moritz Minzlaff , Alexander Wolff

We provide the first algorithm for computing an optimal tree decomposition for a given graph $G$ that runs in single exponential time in the feedback vertex number of $G$, that is, in time $2^{O(\text{fvn}(G))}\cdot n^{O(1)}$, where…

Data Structures and Algorithms · Computer Science 2026-05-19 Hendrik Molter , Meirav Zehavi , Amit Zivan

For a graph $G = (V, E)$, the $\gamma$-graph of $G$, denoted $G(\gamma) = (V(\gamma), E(\gamma))$, is the graph whose vertex set is the collection of minimum dominating sets, or $\gamma$-sets of $G$, and two $\gamma$-sets are adjacent in…

Combinatorics · Mathematics 2019-07-31 Stephen Finbow , Christopher M. van Bommel

Given a graph $G=(V,E)$, a set $\mathcal{F}$ of forbidden subgraphs, we study $\mathcal{F}$-Free Edge Deletion, where the goal is to remove minimum number of edges such that the resulting graph does not contain any $F\in \mathcal{F}$ as a…

Data Structures and Algorithms · Computer Science 2021-02-12 Ajinkya Gaikwad , Soumen Maity

Tree Containment is a fundamental problem in phylogenetics useful for verifying a proposed phylogenetic network, representing the evolutionary history of certain species. Tree Containment asks whether the given phylogenetic tree (for…

Populations and Evolution · Quantitative Biology 2024-06-14 Arkadiy Dushatskiy , Esther Julien , Leen Stougie , Leo van Iersel

In this paper we describe a randomized algorithm which returns a maximal spanning forest of an unknown {\em weighted} undirected graph making $O(n)$ $\mathsf{CUT}$ queries in expectation. For weighted graphs, this is optimal due to a result…

Data Structures and Algorithms · Computer Science 2023-06-21 Hang Liao , Deeparnab Chakrabarty

This paper investigates the problem of regression model generation. A model is a superposition of primitive functions. The model structure is described by a weighted colored graph. Each graph vertex corresponds to some primitive function.…

Machine Learning · Statistics 2024-06-28 Radoslav G. Neychev , Innokentiy A. Shibaev , Vadim V. Strijov

Given a simple, unweighted, undirected graph $G=(V,E)$ with $|V|=n$ and $|E|=m$, and parameters $0 < \varepsilon, \delta <1$, along with \texttt{Degree}, \texttt{Neighbour}, \texttt{Edge} and \texttt{RandomEdge} query access to $G$, we…

Data Structures and Algorithms · Computer Science 2025-02-24 Arijit Bishnu , Debarshi Chanda , Gopinath Mishra

We study the problem of deleting the smallest set $S$ of vertices (resp. edges) from a given graph $G$ such that the induced subgraph (resp. subgraph) $G \setminus S$ belongs to some class $\mathcal{H}$. We consider the case where graphs in…

Data Structures and Algorithms · Computer Science 2018-10-24 Anupam Gupta , Euiwoong Lee , Jason Li , Pasin Manurangsi , Michał Włodarczyk

Our input is a directed, rooted graph $G = (V \cup \{r\},E)$ where each vertex in $V$ has a partial order preference over its incoming edges. The preferences of a vertex extend naturally to preferences over arborescences rooted at $r$. We…

Data Structures and Algorithms · Computer Science 2023-10-31 Telikepalli Kavitha , Kazuhisa Makino , Ildikó Schlotter , Yu Yokoi

The weight of the minimum spanning tree in a complete weighted graph with random edge weights is a well-known problem. For various classes of distributions, it is proved that the weight of the minimum spanning tree tends to a constant,…

Combinatorics · Mathematics 2024-05-31 Nikita Zvonkov

We study the problem of detecting and recovering a planted spanning tree $M_n^*$ hidden within a complete, randomly weighted graph $G_n$. Specifically, each edge $e$ has a non-negative weight drawn independently from $P_n$ if $e \in M_n^*$…

Data Structures and Algorithms · Computer Science 2025-07-08 Mehrdad Moharrami , Cristopher Moore , Jiaming Xu

We study approaches for the exact solution of the \NP--hard minimum spanning tree problem under conflict constraints. Given a graph $G(V,E)$ and a set $C \subset E \times E$ of conflicting edge pairs, the problem consists of finding a…

Data Structures and Algorithms · Computer Science 2014-07-01 Phillippe Samer , Sebastián Urrutia

Graph theory is increasingly commonly utilised in genetics, proteomics and neuroimaging. In such fields, the data of interest generally constitute weighted graphs. Analysis of such weighted graphs often require the integration of…

Molecular Networks · Quantitative Biology 2011-06-09 Cedric E. Ginestet , Andrew Simmons

A linear forest is a union of vertex-disjoint paths, and the linear arboricity of a graph $G$, denoted by $\operatorname{la}(G)$, is the minimum number of linear forests needed to partition the edge set of $G$. Clearly,…

Combinatorics · Mathematics 2023-10-03 Guantao Chen , Yanli Hao , Guoning Yu

A $(\beta,\delta,\Delta)$-padded decomposition of an edge-weighted graph $G = (V,E,w)$ is a stochastic decomposition into clusters of diameter at most $\Delta$ such that for every vertex $v\in V$, the probability that…

Data Structures and Algorithms · Computer Science 2025-10-15 Arnold Filtser , Tobias Friedrich , Davis Issac , Nikhil Kumar , Hung Le , Nadym Mallek , Ziena Zeif

Let v(G) be the number of vertices and t(G,k) the maximum number of disjoint k-edge trees in G. In this paper we show that (a1) if G is a graph with every vertex of degree at least two and at most s, where s > 3, then t(G,2) is at least…

Combinatorics · Mathematics 2007-05-23 Alexander Kelmans

In the densest subgraph problem, given a weighted undirected graph $G(V,E,w)$, with non-negative edge weights, we are asked to find a subset of nodes $S\subseteq V$ that maximizes the degree density $w(S)/|S|$, where $w(S)$ is the sum of…

Social and Information Networks · Computer Science 2019-04-18 Charalampos E. Tsourakakis , Tianyi Chen , Naonori Kakimura , Jakub Pachocki

Let $\Lambda(T)$ denote the set of leaves in a tree $T$. One natural problem is to look for a spanning tree $T$ of a given graph $G$ such that $\Lambda(T)$ is as large as possible. This problem is called maximum leaf number, and it is a…

Combinatorics · Mathematics 2026-02-19 Peter Bradshaw , Tomáš Masařík , Jana Novotná , Ladislav Stacho