Related papers: Pyclipse, a library for deidentification of free-t…

Codification of free-text clinical narratives have long been recognised to be beneficial for secondary uses such as funding, insurance claim processing and research. The current scenario of assigning codes is a manual process which is very…

This paper proposes a self-supervised learning method for the person re-identification (re-ID) problem, where existing unsupervised methods usually rely on pseudo labels, such as those from video tracklets or clustering. A potential…

With the rapid development of Large Language Models (LLMs), a large number of benchmarks have been proposed. However, most benchmarks lack unified evaluation standard and require the manual implementation of custom scripts, making results…

Open-world object detection, as a more general and challenging goal, aims to recognize and localize objects described by arbitrary category names. The recent work GLIP formulates this problem as a grounding problem by concatenating all…

The delayed and incomplete availability of historical findings and the lack of integrative and user-friendly software hampers the reliable interpretation of new clinical data. We developed a free, open, and user-friendly clinical trial…

Face de-identification (FDeID) aims to remove personally identifiable information from facial images while preserving task-relevant utility attributes such as age, gender, and expression. It is critical for privacy-preserving computer…

Background: Formulation, associated with suicide risk assessment, is an individualised process that seeks to understand the idiosyncratic nature and development of an individual's problems. Auditing clinical documentation on an electronic…

Dense visual perception tasks have been constrained by their reliance on predefined categories, limiting their applicability in real-world scenarios where visual concepts are unbounded. While Vision-Language Models (VLMs) like CLIP have…

De-identification of clinical records is an extremely important process which enables the use of the wealth of information present in them. There are a lot of techniques available for this but none of the method implementation has evaluated…

Pseudocode in a scholarly paper provides a concise way to express the algorithms implemented therein. Pseudocode can also be thought of as an intermediary representation that helps bridge the gap between programming languages and natural…

Background and Objective: Open-source deep learning toolkits are one of the driving forces for developing medical image segmentation models. Existing toolkits mainly focus on fully supervised segmentation and require full and accurate…

We present Distill CLIP (DCLIP), a fine-tuned variant of the CLIP model that enhances multimodal image-text retrieval while preserving the original model's strong zero-shot classification capabilities. CLIP models are typically constrained…

Biomedical text tagging systems are plagued by the dearth of labeled training data. There have been recent attempts at using pre-trained encoders to deal with this issue. Pre-trained encoder provides representation of the input text which…

Despite the explosion of interest in healthcare AI research, the reproducibility and benchmarking of those research works are often limited due to the lack of standard benchmark datasets and diverse evaluation metrics. To address this…

Large-scale datasets have been pivotal to the advancements of deep learning models in recent years, but training on such large datasets invariably incurs substantial storage and computational overhead. Meanwhile, real-world datasets often…

With the availability of virtually infinite number text documents in digital format, automatic comparison of textual data is essential for extracting meaningful insights that are difficult to identify manually. Many existing tools,…

Machine learning classification problems are widespread in bioinformatics, but the technical knowledge required to perform model training, optimization, and inference can prevent researchers from utilizing this technology. This article…

Automated clinical text anonymization has the potential to unlock the widespread sharing of textual health data for secondary usage while assuring patient privacy and safety. Despite the proposal of many complex and theoretically successful…

Despite the successes of language models, their evaluation remains a daunting challenge for new and existing tasks. We consider the task of text simplification, commonly used to improve information accessibility, where evaluation faces two…

Background Clinical trials are essential to advancing cancer treatments, yet fewer than 10% of adults with cancer enroll in trials, and many studies fail to meet accrual targets. Artificial intelligence (AI) could improve identification of…