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Magnetic resonance imaging (MRI), especially functional MRI (fMRI) and diffusion MRI (dMRI), is essential for studying neurodegenerative diseases. However, missing modalities pose a major barrier to their clinical use. Although GAN- and…

Computer Vision and Pattern Recognition · Computer Science 2025-11-10 Xiongri Shen , Jiaqi Wang , Yi Zhong , Zhenxi Song , Leilei Zhao , Yichen Wei , Lingyan Liang , Shuqiang Wang , Baiying Lei , Demao Deng , Zhiguo Zhang

Tractography algorithms are used extensively to delineate white matter structures, by operating on the voxel-wise information generated through the application of diffusion tensor imaging (DTI) or other models to diffusion weighted (DW)…

Quantitative Methods · Quantitative Biology 2024-03-05 Richard G. Carson , Alexander Leemans

We model porous membrane filters as networks of connected cylindrical pores via a random network generation protocol, and their initial pore radii via a uniform distribution of widths that vary about some mean value. We investigate the…

Soft Condensed Matter · Physics 2022-02-28 Binan Gu , Lou Kondic , Linda J. Cummings

Diffusion magnetic resonance imaging datasets suffer from low Signal-to-Noise Ratio, especially at high b-values. Acquiring data at high b-values contains relevant information and is now of great interest for microstructural and…

Computer Vision and Pattern Recognition · Computer Science 2016-06-27 Samuel St-Jean , Pierrick Coupé , Maxime Descoteaux

Brain MRI scans are often found in four modalities, consisting of T1-weighted with and without contrast enhancement (T1ce and T1w), T2-weighted imaging (T2w), and Flair. Leveraging complementary information from these different modalities…

Image and Video Processing · Electrical Eng. & Systems 2025-09-22 Bhavesh Sandbhor , Bheeshm Sharma , Balamurugan Palaniappan

Diffusional kurtosis imaging (DKI) is a methodology for measuring the extent of non-Gaussian diffusion in biological tissue, which has shown great promise in clinical diagnosis, treatment planning and monitoring of many neurological…

Image and Video Processing · Electrical Eng. & Systems 2024-04-29 Megan E. Farquhar , Qianqian Yang , Viktor Vegh

Diffusion Magnetic Resonance Imaging (dMRI) is an imaging technique with exquisite sensitivity to the microstructural properties of heterogeneous media. The conventionally adopted acquisition schemes involving single pulsed field gradients…

Biological Physics · Physics 2023-01-04 Deneb Boito , Cem Yolcu , Evren Özarslan

Purpose: In diffusion MRI (dMRI), the volumetric and bundle analyses of whole-brain tissue microstructure and connectivity can be severely impeded by an incomplete field-of-view (FOV). This work aims to develop a method for imputing the…

Imaging modalities provide clinicians with real-time visualization of anatomical regions of interest (ROI) for the purpose of minimally invasive surgery. During the procedure, low-resolution image data are acquired and registered with…

Medical Physics · Physics 2020-11-10 Haolin Liu , Ye Han , Daniel Emerson , Houriyeh Majditehran , Qi Wang , Yoed Rabin , Levent Burak Kara

Text-to-image (T2I) diffusion models lack an efficient mechanism for early quality assessment, leading to costly trial-and-error in multi-generation scenarios such as prompt iteration, agent-based generation, and flow-grpo. We reveal a…

Computer Vision and Pattern Recognition · Computer Science 2026-03-27 Benlei Cui , Bukun Huang , Zhizeng Ye , Xuemei Dong , Tuo Chen , Hui Xue , Dingkang Yang , Longtao Huang , Jingqun Tang , Haiwen Hong

Diffusion-weighted magnetic resonance imaging (D-MRI) is an in-vivo and non-invasive imaging technology to probe anatomical architectures of biological samples. The anatomy of white matter fiber tracts in the brain can be revealed to help…

Applications · Statistics 2023-05-18 Jilei Yang , Seungyong Hwang , Jie Peng

The diffusion/relaxation behavior of polarized spins of pore filling fluid, as often probed by NMR relaxometry, is widely used to extract information on the pore-geometry. Such information is further interpreted as an indicator of the key…

Soft Condensed Matter · Physics 2016-09-13 Seungoh Ryu , Weishu Zhao , Gabriela Leu , Philip M. Singer , Hyung Joon Cho , Youngseuk Keehm

Diffusion MRI affords valuable insights into white matter microstructures, but suffers from low signal-to-noise ratio (SNR), especially at high diffusion weighting (i.e., b-value). To avoid time-intensive repeated acquisition,…

Medical Physics · Physics 2018-07-26 Geng Chen , Yafeng Wu , Dinggang Shen , Pew-Thian Yap

Our understanding of the human connectome is fundamentally limited by the resolution of diffusion MR images. Reconstructing a connectome's constituent neural pathways with tractography requires following a continuous field of fiber…

Computer Vision and Pattern Recognition · Computer Science 2023-12-12 Tyler Spears , P. Thomas Fletcher

Diffusion tensor imaging (DTI) plays a key role in analyzing the physical structures of biological tissues, particularly in reconstructing fiber tracts of the human brain in vivo. On the one hand, eigenvalues of diffusion tensors (DTs)…

Applications · Statistics 2013-04-18 Tao Yu , Chunming Zhang , Andrew L. Alexander , Richard J. Davidson

In this work, we propose a realistic, physics-aware motion simulation procedure for T2*-weighted magnetic resonance imaging (MRI) to improve learning-based motion correction. As T2*-weighted MRI is highly sensitive to motion-related changes…

Image and Video Processing · Electrical Eng. & Systems 2023-10-17 Hannah Eichhorn , Kerstin Hammernik , Veronika Spieker , Samira M. Epp , Daniel Rueckert , Christine Preibisch , Julia A. Schnabel

The fiber g-ratio is the ratio of the inner to the outer diameter of the myelin sheath of a myelinated axon. It has a limited dynamic range in healthy white matter, as it is optimized for speed of signal conduction, cellular energetics, and…

Diffusion-based models have achieved notable empirical successes in reinforcement learning (RL) due to their expressiveness in modeling complex distributions. Despite existing methods being promising, the key challenge of extending existing…

Machine Learning · Computer Science 2024-11-04 Dmitry Shribak , Chen-Xiao Gao , Yitong Li , Chenjun Xiao , Bo Dai

Many natural fibrous networks with fiber diameters much smaller than the average poresize can be described as three-dimensional (3D) random line networks. We consider here a `Mikado' model for such systems, consisting of straight line…

Quantitative Methods · Quantitative Biology 2011-10-11 Claus Metzner , Patrick Krauss , Ben Fabry

As recent advances in large-scale Text-to-Image (T2I) diffusion models have yielded remarkable high-quality image generation, diverse downstream Image-to-Image (I2I) applications have emerged. Despite the impressive results achieved by…

Computer Vision and Pattern Recognition · Computer Science 2024-10-11 Geonung Kim , Beomsu Kim , Eunhyeok Park , Sunghyun Cho