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Graph-structured data ubiquitously appears in science and engineering. Graph neural networks (GNNs) are designed to exploit the relational inductive bias exhibited in graphs; they have been shown to outperform other forms of neural networks…

Machine Learning · Computer Science 2021-02-03 Veronika Thost , Jie Chen

To represent the causal relationships between variables, a directed acyclic graph (DAG) is widely utilized in many areas, such as social sciences, epidemics, and genetics. Many causal structure learning approaches are developed to learn the…

Machine Learning · Statistics 2025-01-14 Jianian Wang , Rui Song

Signal processing on directed graphs (digraphs) is problematic, since the graph shift, and thus associated filters, are in general not diagonalizable. Furthermore, the Fourier transform in this case is now obtained from the Jordan…

Signal Processing · Electrical Eng. & Systems 2021-05-20 Bastian Seifert , Markus Püschel

Aligning sequencing reads on graph representations of genomes is an important ingredient of pan-genomics. Such approaches typically find a set of local anchors that indicate plausible matches between substrings of a read to subpaths of the…

Data Structures and Algorithms · Computer Science 2018-01-30 Anna Kuosmanen , Topi Paavilainen , Travis Gagie , Rayan Chikhi , Alexandru I. Tomescu , Veli Mäkinen

We consider the PC-algorithm Spirtes et. al. (2000) for estimating the skeleton of a very high-dimensional acyclic directed graph (DAG) with corresponding Gaussian distribution. The PC-algorithm is computationally feasible for sparse…

Statistics Theory · Mathematics 2007-06-13 Markus Kalisch , Peter Buehlmann

Self-reset analog-to-digital converters (ADCs) are used to sample high dynamic range signals resulting in modulo-operation based folded signal samples. We consider the case where each vertex of a graph (e.g., sensors in a network) is…

Signal Processing · Electrical Eng. & Systems 2020-01-22 Feng Ji , Pratibha , Wee Peng Tay

A common theme in causal inference is learning causal relationships between observed variables, also known as causal discovery. This is usually a daunting task, given the large number of candidate causal graphs and the combinatorial nature…

Machine Learning · Statistics 2022-10-11 Romain Lopez , Jan-Christian Hütter , Jonathan K. Pritchard , Aviv Regev

Inferring the structure of directed acyclic graphs (DAGs) from data is a central challenge in causal discovery, particularly in modern high-dimensional settings where large-scale interventional data are increasingly available. While…

Random directed acyclic graphs (DAGs) based on imposing an order on Erd\H{o}s-R\'enyi and scale free random graphs are widely used for evaluating causal discovery algorithms. We show that in such DAGs, the set of nodes reachable via open…

Methodology · Statistics 2026-05-08 Alexander G. Reisach , Antoine Chambaz , Gilles Blanchard , Sebastian Weichwald

We study a distributed learning problem in which learning agents are embedded in a directed acyclic graph (DAG). There is a fixed and arbitrary distribution over feature/label pairs, and each agent or vertex in the graph is able to directly…

Machine Learning · Computer Science 2025-10-13 Michael Kearns , Aaron Roth , Emily Ryu

Graph signal processing uses the graph eigenvector basis to analyze signals. However, these graph eigenvectors are typically linearly ordered (by total variation), which may not be reasonable for many graph structures. There have been…

Information Theory · Computer Science 2022-02-22 Subbareddy Batreddy , S Sai Ashish , Aditya Siripuram

One of the most significant challenges of EEG-based emotion recognition is the cross-subject EEG variations, leading to poor performance and generalizability. This paper proposes a novel EEG-based emotion recognition model called the domain…

Signal Processing · Electrical Eng. & Systems 2022-03-01 Tao Xu , Wang Dang , Jiabao Wang , Yun Zhou

Directed Acyclic Graphs (DAGs) are commonly used in Databases and Big Data computational engines like Apache Spark for representing the execution plan of queries. We refer to such graphs as Query Directed Acyclic Graphs (QDAGs). This paper…

Databases · Computer Science 2022-07-15 Sweta Singh , Vaibhav Kulkarni , Mario Briggs , Deepak Mahajan , Eitan Farchi

Learning the structure of dependence relations between variables is a pervasive issue in the statistical literature. A directed acyclic graph (DAG) can represent a set of conditional independences, but different DAGs may encode the same set…

Methodology · Statistics 2021-02-15 Federico Castelletti , Stefano Peluso

We introduce SeaDAG, a semi-autoregressive diffusion model for conditional generation of Directed Acyclic Graphs (DAGs). Considering their inherent layer-wise structure, we simulate layer-wise autoregressive generation by designing…

Machine Learning · Computer Science 2024-10-22 Xinyi Zhou , Xing Li , Yingzhao Lian , Yiwen Wang , Lei Chen , Mingxuan Yuan , Jianye Hao , Guangyong Chen , Pheng Ann Heng

Causal graphs, such as directed acyclic graphs (DAGs) and partial ancestral graphs (PAGs), represent causal relationships among variables in a model. Methods exist for learning DAGs and PAGs from data and for converting DAGs to PAGs.…

Machine Learning · Statistics 2018-01-19 Nishant Subramani

We consider supervised learning problems where the features are embedded in a graph, such as gene expressions in a gene network. In this context, it is of much interest to automatically select a subgraph with few connected components; by…

Machine Learning · Statistics 2013-09-20 Julien Mairal , Bin Yu

Our goal is to infer the topology of a network when (i) we can send probes between sources and receivers at the edge of the network and (ii) intermediate nodes can perform simple network coding operations, i.e., additions. Our key intuition…

Networking and Internet Architecture · Computer Science 2013-02-07 Pegah Sattari , Christina Fragouli , Athina Markopoulou

Causal discovery, the learning of causality in a data mining scenario, has been of strong scientific and theoretical interest as a starting point to identify "what causes what?" Contingent on assumptions and a proper learning algorithm, it…

Methodology · Statistics 2022-05-23 Gabriel Ruiz , Oscar Hernan Madrid Padilla , Qing Zhou

Classical spectral graph theory and graph signal processing rely on a symmetry principle: undirected graphs induce symmetric (self-adjoint) adjacency/Laplacian operators, yielding orthogonal eigenbases and energy-preserving Fourier…

Rings and Algebras · Mathematics 2026-02-13 Chandrasekhar Gokavarapu