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Continuum solvation models are becoming increasingly relevant in condensed matter simulations, allowing to characterize materials interfaces in the presence of wet electrified environments at a reduced computational cost with respect to all…

Computational Physics · Physics 2023-08-16 Gabriel Medrano , Edan Bainglass , Oliviero Andreussi

The potential energy landscape (PEL) formalism is a tool within statistical mechanics that has been used in the past to calculate the equation of states (EOS) of classical rigid model liquids at low temperatures, where computer simulations…

Soft Condensed Matter · Physics 2024-01-18 Ali Eltareb , Gustavo E. Lopez , Nicolas Giovambattista

We develop a general framework to calculate the many-body density of states (DOS) of isolated and interacting quantum systems. Based on the generalized coherent state formalism and the Simon-Lieb bounds for a quantum partition function, our…

Strongly Correlated Electrons · Physics 2026-04-17 Deniz Coskun , R. Chitra

Probabilistic graphical models are powerful mathematical formalisms for machine learning and reasoning under uncertainty that are widely used for cognitive computing. However they cannot be employed efficiently for large problems (with…

More accurate, spatio-temporally, and physically consistent LST estimation has been a main interest in Earth system research. Developing physics-driven mechanism models and data-driven machine learning (ML) models are two major paradigms…

Atmospheric and Oceanic Physics · Physics 2023-07-12 Jun Ma , Huanfeng Shen , Menghui Jiang , Liupeng Lin , Chunlei Meng , Chao Zeng , Huifang Li , Penghai Wu

Spherically-symmetric atom-centered descriptors of atomic environments have been widely used for constructing potential or free energy surfaces of atomistic and colloidal systems and to characterize local structures using machine learning…

Soft Condensed Matter · Physics 2022-07-27 Gerardo Campos-Villalobos , Giuliana Giunta , Susana Marín-Aguilar , Marjolein Dijkstra

Interactions between crawling cells, which are essential for many biological processes, can be quantified by measuring cell-cell collisions. Conventionally, experiments of cell-cell collisions are conducted on two-dimensional flat…

Biological Physics · Physics 2025-10-24 Yongtian Luo , Amrinder S. Nain , Brian A. Camley

We study the dynamics of a mean-field Ising model whose coupling depends on the magnetization via a linear feedback function. A key feature of this linear feedback Ising model (FIM) is the possibility of temperature-induced bistability,…

Statistical Mechanics · Physics 2026-03-31 Yi-Ping Ma , Ivan Sudakow , P. L. Krapivsky , Sergey A. Vakulenko

The organization of live cells into tissues and their subsequent biological function involves inter-cell mechanical interactions, which are mediated by their elastic environment. To model this interaction, we consider cells as spherical…

Soft Condensed Matter · Physics 2024-02-20 Roman Golkov , Yair Shokef

Understanding the behaviour of biological systems requires a complex setting of in vitro and in vivo experiments, which attracts high costs in terms of time and resources. The use of mathematical models allows researchers to perform…

Computational Engineering, Finance, and Science · Computer Science 2009-11-30 Thomas Anung Basuki , Antonio Cerone , Rafael V. Carvalho

Bayesian probabilistic programming languages (BPPLs) let users denote statistical models as code while the interpreter infers the posterior distribution. The semantics of BPPLs are usually mathematically complex and unable to reason about…

Programming Languages · Computer Science 2025-12-03 Shing Hin Ho , Nicolas Wu , Azalea Raad

Generalized Ising models, also known as cluster expansions, are an important tool in many areas of condensed-matter physics and materials science, as they are often used in the study of lattice thermodynamics, solid-solid phase transitions,…

Statistical Mechanics · Physics 2016-06-27 Wenxuan Huang , Daniil Kitchaev , Stephen Dacek , Ziqin Rong , Zhiwei Ding , Gerbrand Ceder

A perturbative model is studied for the tunneling of many-particle states from the ground band to the first excited energy band, mimicking Landau-Zener decay for ultracold, spinless atoms in quasi-one dimensional optical lattices subjected…

Other Condensed Matter · Physics 2007-10-10 Andrea Tomadin , Riccardo Mannella , Sandro Wimberger

Ultracold polar molecules in multilayered systems have been experimentally realized very recently. While experiments study these systems almost exclusively through their chemical reactivity, the outlook for creating and manipulating exotic…

Quantum Physics · Physics 2013-04-19 A. G. Volosniev , J. R. Armstrong , D. V. Fedorov , A. S. Jensen , N. T. Zinner

Several cellular activities, such as directed cell migration, are coordinated by an intricate network of biochemical reactions which lead to a polarised state of the cell, in which cellular symmetry is broken, causing the cell to have a…

Cell Behavior · Quantitative Biology 2018-09-13 Davide Cusseddu , Leah Edelstein-Keshet , John A. Mackenzie , Stéphanie Portet , Anotida Madzvamuse

We present an isotropic ab initio (para-H$_2$)$_4$ four-body interaction potential energy surface (PES). The electronic structure calculations are performed at the correlated coupled-cluster theory level, with single, double, and…

Chemical Physics · Physics 2025-06-09 Alexander Ibrahim , Pierre-Nicholas Roy

A random-field Ising model that is capable of exhibiting a rich variety of multicritical phenomena, as well as a smearing of such behavior, is investigated. The model consists of an infinite-range-interaction Ising ferromagnet in the…

Statistical Mechanics · Physics 2009-01-16 Octavio R. Salmon , Nuno Crokidakis , Fernando D. Nobre

The Many-Body Expansion (MBE) is a useful tool to simulate condensed phase chemical systems, often avoiding the steep computational cost of usual electronic structure methods. However, it often requires higher than 2-body terms to achieve…

Chemical Physics · Physics 2019-11-21 Srimukh Prasad Veccham , Joonho Lee , Martin Head-Gordon

We propose a self-consistent scheme for the determination of the ground-state (GS) properties of interacting electrons in a magnetic field, and of systems whose GS's time-reversal-symmetry (TRS) is spontaneously broken. It is based on a…

Mesoscale and Nanoscale Physics · Physics 2009-10-28 Behnam Farid

Within the scenario of the potential energy landscape (PEL), a thermodynamic model has been developed to uncover the physics behind the Angell plot. In our model, by separating the barrier distribution in PELs into a Gaussian-like and a…

Materials Science · Physics 2023-01-04 D. M. Zhang , D. Y. Sun , X. G. Gong