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Medical information retrieval (MIR) is essential for retrieving relevant medical knowledge from diverse sources, including electronic health records, scientific literature, and medical databases. However, achieving effective zero-shot dense…

Information Retrieval · Computer Science 2025-05-27 Lei Li , Xiangxu Zhang , Xiao Zhou , Zheng Liu

Information retrieval (IR) for precision medicine (PM) often involves looking for multiple pieces of evidence that characterize a patient case. This typically includes at least the name of a condition and a genetic variation that applies to…

Computation and Language · Computer Science 2020-12-18 Jiho Noh , Ramakanth Kavuluru

Here we study the semantic search and retrieval problem in biomedical digital libraries. First, we introduce MedGraph, a knowledge graph embedding-based method that provides semantic relevance retrieval and ranking for the biomedical…

Information Retrieval · Computer Science 2021-12-15 Islam Akef Ebeid , Elizabeth Pierce

One important challenge in modern Content-Based Medical Image Retrieval (CBMIR) approaches is represented by the semantic gap, related to the complexity of the medical knowledge. Among the methods that are able to close this gap in CBMIR,…

Information Retrieval · Computer Science 2008-12-01 Roxana Teodorescu , Daniel Racoceanu , Wee-Kheng Leow , Vladimir Cretu

As artificial intelligence and digital medicine increasingly permeate healthcare systems, robust governance frameworks are essential to ensure ethical, secure, and effective implementation. In this context, medical image retrieval becomes a…

Computer Vision and Pattern Recognition · Computer Science 2025-06-30 Yang Nan , Huichi Zhou , Xiaodan Xing , Giorgos Papanastasiou , Lei Zhu , Zhifan Gao , Alejandro F Fangi , Guang Yang

Medical entity retrieval is an integral component for understanding and communicating information across various health systems. Current approaches tend to work well on specific medical domains but generalize poorly to unseen…

Computation and Language · Computer Science 2021-05-27 Luyang Kong , Christopher Winestock , Parminder Bhatia

Given a query and a document corpus, the information retrieval (IR) task is to output a ranked list of relevant documents. Combining large language models (LLMs) with embedding-based retrieval models, recent work shows promising results on…

Computation and Language · Computer Science 2023-11-01 Daman Arora , Anush Kini , Sayak Ray Chowdhury , Nagarajan Natarajan , Gaurav Sinha , Amit Sharma

It is necessary for clinicians to comprehensively analyze patient information from different sources. Medical image fusion is a promising approach to providing overall information from medical images of different modalities. However,…

Image and Video Processing · Electrical Eng. & Systems 2019-12-12 Fanda Fan , Yunyou Huang , Lei Wang , Xingwang Xiong , Zihan Jiang , Zhifei Zhang , Jianfeng Zhan

We propose Referral-Augmented Retrieval (RAR), a simple technique that concatenates document indices with referrals, i.e. text from other documents that cite or link to the given document, to provide significant performance gains for…

Computation and Language · Computer Science 2023-05-25 Michael Tang , Shunyu Yao , John Yang , Karthik Narasimhan

Information retrieval (IR) is essential in biomedical knowledge acquisition and clinical decision support. While recent progress has shown that language model encoders perform better semantic retrieval, training such models requires…

Information Retrieval · Computer Science 2024-01-17 Qiao Jin , Won Kim , Qingyu Chen , Donald C. Comeau , Lana Yeganova , W. John Wilbur , Zhiyong Lu

Medical vision-language pretraining models (VLPM) have achieved remarkable progress in fusing chest X-rays (CXR) with clinical texts, introducing image-text data binding approaches that enable zero-shot learning and downstream clinical…

Computer Vision and Pattern Recognition · Computer Science 2024-03-21 Yuan Gao , Sangwook Kim , David E Austin , Chris McIntosh

Zero-shot classification enables text to be classified into classes not seen during training. In this study, we examine the efficacy of zero-shot learning models in classifying healthcare consultation responses from Doctors and AI systems.…

Computation and Language · Computer Science 2024-01-15 Olumide E. Ojo , Olaronke O. Adebanji , Alexander Gelbukh , Hiram Calvo , Anna Feldman

The goal of rank fusion in information retrieval (IR) is to deliver a single output list from multiple search results. Improving performance by combining the outputs of various IR systems is a challenging task. A central point is the fact…

Retrieval-Augmented Generation (RAG) struggles with domain-specific enterprise datasets, often isolated behind firewalls and rich in complex, specialized terminology unseen by LLMs during pre-training. Semantic variability across domains…

Computation and Language · Computer Science 2025-08-06 Kunal Sawarkar , Shivam R. Solanki , Abhilasha Mangal

Novel information retrieval methods to identify citations relevant to a clinical topic can overcome the knowledge gap existing between the primary literature (MEDLINE) and online clinical knowledge resources such as UpToDate. Searching the…

Computation and Language · Computer Science 2016-09-07 Kalpana Raja , Andrew J Sauer , Ravi P Garg , Melanie R Klerer , Siddhartha R Jonnalagadda

The integration of diverse clinical modalities such as medical imaging and the tabular data extracted from patients' Electronic Health Records (EHRs) is a crucial aspect of modern healthcare. Integrative analysis of multiple sources can…

Computer Vision and Pattern Recognition · Computer Science 2025-04-22 Daniel Duenias , Brennan Nichyporuk , Tal Arbel , Tammy Riklin Raviv

Multimodal medical image fusion plays a crucial role in medical diagnosis by integrating complementary information from different modalities to enhance image readability and clinical applicability. However, existing methods mainly follow…

Computer Vision and Pattern Recognition · Computer Science 2025-05-20 Haozhe Xiang , Han Zhang , Yu Cheng , Xiongwen Quan , Wanwan Huang

Zero-shot entity retrieval, aiming to link mentions to candidate entities under the zero-shot setting, is vital for many tasks in Natural Language Processing. Most existing methods represent mentions/entities via the sentence embeddings of…

Computation and Language · Computer Science 2022-11-22 Taiqiang Wu , Xingyu Bai , Weigang Guo , Weijie Liu , Siheng Li , Yujiu Yang

This paper highlights the growing importance of information retrieval (IR) engines in the scientific community, addressing the inefficiency of traditional keyword-based search engines due to the rising volume of publications. The proposed…

Information Retrieval · Computer Science 2024-10-24 Mahsa Shamsabadi , Jennifer D'Souza

Online medical service provides patients convenient access to doctors, but effectively ranking doctors based on specific medical needs remains challenging. Current ranking approaches typically lack the interpretability crucial for patient…

Information Retrieval · Computer Science 2025-11-25 Ziyang Zeng , Dongyuan Li , Yuqing Yang
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