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The \emph{Order-Maintenance} (OM) data structure maintains a total order list of items for insertions, deletions, and comparisons. As a basic data structure, OM has many applications, such as maintaining the topological order, core numbers,…
Ordered Binary Decision Diagrams (OBDDs) are a data structure that is used in an increasing number of fields of Computer Science (e.g., logic synthesis, program verification, data mining, bioinformatics, and data protection) for…
The range-minimum query (RMQ) problem is a fundamental data structuring task with numerous applications. Despite the fact that succinct solutions with worst-case optimal $2n+o(n)$ bits of space and constant query time are known, it has been…
This paper presents the first theoretical results showing that stable identification of overcomplete $\mu$-coherent dictionaries $\Phi \in \mathbb{R}^{d\times K}$ is locally possible from training signals with sparsity levels $S$ up to the…
A choice dictionary can be initialized with a parameter $n\in\mathbb{N}$ and subsequently maintains an initially empty subset $S$ of $\{1,\ldots,n\}$ under insertion, deletion, membership queries and an operation $\textit{choice}$ that…
We introduce a compressed suffix array representation that, on a text $T$ of length $n$ over an alphabet of size $\sigma$, can be built in $O(n)$ deterministic time, within $O(n\log\sigma)$ bits of working space, and counts the number of…
We investigate labeling schemes supporting adjacency, ancestry, sibling, and connectivity queries in forests. In the course of more than 20 years, the existence of $\log n + O(\log \log)$ labeling schemes supporting each of these functions…
The interest in channel models in which the data is sent as an unordered set of binary strings has increased lately, due to emerging applications in DNA storage, among others. In this paper we analyze the minimal redundancy of binary codes…
Data storage applications require erasure-correcting codes with prescribed sets of dependencies between data symbols and redundant symbols. The most common arrangement is to have $k$ data symbols and $h$ redundant symbols (that each depends…
A major concern in cloud/edge storage systems is serving a large number of users simultaneously. The service rate region is introduced recently as an important performance metric for coded distributed systems, which is defined as the set of…
Recent work by Elmasry et al. (STACS 2015) and Asano et al. (ISAAC 2014), reconsidered classical fundamental graph algorithms focusing on improving the space complexity. We continue this line of work focusing on space. Our first result is a…
Recent work by Smagloy et al. (ISIT 2020) shows that the redundancy of a single-deletion $s$-substitution correcting code is asymptotically at least $(s+1)\log n+o(\log n)$, where $n$ is the length of the codes. They also provide a…
Due to its higher data density, longevity, energy efficiency, and ease of generating copies, DNA is considered a promising storage technology for satisfying future needs. However, a diverse set of errors including deletions, insertions,…
We study universal compression of sequences generated by monotonic distributions. We show that for a monotonic distribution over an alphabet of size $k$, each probability parameter costs essentially $0.5 \log (n/k^3)$ bits, where $n$ is the…
We consider the problem of computing the Maximal Exact Matches (MEMs) of a given pattern $P[1 .. m]$ on a large repetitive text collection $T[1 .. n]$, which is represented as a (hopefully much smaller) run-length context-free grammar of…
We propose a theoretically-efficient and practical parallel batch-dynamic data structure for the closest pair problem. Our solution is based on a serial dynamic closest pair data structure by Golin et al., and supports batches of insertions…
Motivated by applications in in-vivo DNA storage, we study codes for correcting duplications. A reverse-complement duplication of length $k$ is the insertion of the reversed and complemented copy of a substring of length $k$ adjacent to its…
We study the problem of rewriting a disjunctive datalog program into plain datalog. We show that a disjunctive program is rewritable if and only if it is equivalent to a linear disjunctive program, thus providing a novel characterisation of…
Many services today massively and continuously produce log files of different and varying formats. These logs are important since they contain information about the application activities, which is necessary for improvements by analyzing…
Traditional databases commonly support efficient query and update procedures that operate in time which is sublinear in the size of the database. Our goal in this paper is to take a first step toward dynamic reasoning in probabilistic…