Related papers: Keyword-optimized Template Insertion for Clinical …
Objective: Clinical deep phenotyping and phenotype annotation play a critical role in both the diagnosis of patients with rare disorders as well as in building computationally-tractable knowledge in the rare disorders field. These processes…
Most advances in medical image recognition supporting clinical auxiliary diagnosis meet challenges due to the low-resource situation in the medical field, where annotations are highly expensive and professional. This low-resource problem…
Pixel-wise annotations are notoriously labourious and costly to obtain in the medical domain. To mitigate this burden, weakly supervised approaches based on bounding box annotations-much easier to acquire-offer a practical alternative.…
Automatic extraction of medical information from clinical documents poses several challenges: high costs of required clinical expertise, limited interpretability of model predictions, restricted computational resources and privacy…
Recent advances in large pre-trained language models (PLMs) lead to impressive gains in natural language understanding (NLU) tasks with task-specific fine-tuning. However, directly fine-tuning PLMs heavily relies on sufficient labeled…
Identifying suicidality including suicidal ideation, attempts, and risk factors in electronic health record data in clinical notes is difficult. A major difficulty is the lack of training samples given the small number of true positive…
It is expensive and difficult to obtain the large number of sentence-level intent and token-level slot label annotations required to train neural network (NN)-based Natural Language Understanding (NLU) components of task-oriented dialog…
Clinical notes contain an extensive record of a patient's health status, such as smoking status or the presence of heart conditions. However, this detail is not replicated within the structured data of electronic health systems.…
Current methods for prompt learning in zeroshot scenarios widely rely on a development set with sufficient human-annotated data to select the best-performing prompt template a posteriori. This is not ideal because in a realworld zero-shot…
This paper proposes a knowledge-enhanced disease diagnosis method based on a prompt learning framework. The method retrieves structured knowledge from external knowledge graphs related to clinical cases, encodes it, and injects it into the…
Prompt Learning has recently gained great popularity in bridging the gap between pretraining tasks and various downstream tasks. It freezes Pretrained Language Models (PLMs) and only tunes a few task-related parameters (prompts) for…
Recent advances in prompt-based learning have shown strong results on few-shot text classification by using cloze-style templates. Similar attempts have been made on named entity recognition (NER) which manually design templates to predict…
Using prompts to utilize language models to perform various downstream tasks, also known as prompt-based learning or prompt-learning, has lately gained significant success in comparison to the pre-train and fine-tune paradigm. Nonetheless,…
Deep-learning pipelines for microscopy image classification often require expensive, labor- and time-intensive expert annotation to produce high-quality ground truth for training. Recent work has shown that prompt tuning of vision-language…
Citations in scientific papers not only help us trace the intellectual lineage but also are a useful indicator of the scientific significance of the work. Citation intents prove beneficial as they specify the role of the citation in a given…
Vision-language models such as CLIP learn a generic text-image embedding from large-scale training data. A vision-language model can be adapted to a new classification task through few-shot prompt tuning. We find that such a prompt tuning…
Clinical trials are critical for drug development. Constructing the appropriate eligibility criteria (i.e., the inclusion/exclusion criteria for patient recruitment) is essential for the trial's success. Proper design of clinical trial…
The prompt-based learning paradigm, which bridges the gap between pre-training and fine-tuning, achieves state-of-the-art performance on several NLP tasks, particularly in few-shot settings. Despite being widely applied, prompt-based…
In-context learning (ICL) is a few-shot learning paradigm that involves learning mappings through input-output pairs and appropriately applying them to new instances. Despite the remarkable ICL capabilities demonstrated by Large Language…
This paper investigates the potential usage of large text-to-image (LTI) models for the automated diagnosis of a few skin conditions with rarity or a serious lack of annotated datasets. As the input to the LTI model, we provide the targeted…