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Related papers: Spatial Joint Species N-Mixture Models for Multi-S…

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Swarming is a conspicuous behavioural trait observed in bird flocks, fish shoals, insect swarms and mammal herds. It is thought to improve collective awareness and offer protection from predators. Many current models involve the hypothesis…

Quantitative Methods · Quantitative Biology 2015-06-22 Daniel J. G. Pearce , A. M. Miller , George Rowlands , Matthew S. Turner

Spatial ecological networks are widely used to model interactions between georeferenced biological entities (e.g., populations or communities). The analysis of such data often leads to a two-step approach where groups containing similar…

Applications · Statistics 2014-02-24 Vincent Miele , Franck Picard , Stéphane Dray

Monitoring species distribution is vital for conservation efforts, enabling the assessment of environmental impacts and the development of effective preservation strategies. Traditional data collection methods, including citizen science,…

Machine Learning · Computer Science 2025-10-23 Chirag Padubidri , Pranesh Velmurugan , Andreas Lanitis , Andreas Kamilaris

1. Joint species distribution models (JSDMs) have gained considerable traction among ecologists over the past decade, due to their capacity to answer a wide range of questions at both the species- and the community-level. The family of…

Methodology · Statistics 2024-03-19 Pekka Korhonen , Francis K. C. Hui , Jenni Niku , Sara Taskinen , Bert van der Veen

Abundance estimates from animal point-count surveys require accurate estimates of detection probabilities. The standard model for estimating detection from removal-sampled point-count surveys assumes that organisms at a survey site are…

Populations and Evolution · Quantitative Biology 2019-04-09 Adam Martin-Schwarze , Jarad Niemi , Philip Dixon

Model-based clustering is a technique widely used to group a collection of units into mutually exclusive groups. There are, however, situations in which an observation could in principle belong to more than one cluster. In the context of…

Applications · Statistics 2016-05-13 Saverio Ranciati , Cinzia Viroli , Ernst Wit

As the costs of sensors and associated IT infrastructure decreases - as exemplified by the Internet of Things - increasing volumes of observational data are becoming available for use by environmental scientists. However, as the number of…

Machine Learning · Statistics 2022-01-26 Charlie Kirkwood , Theo Economou , Henry Odbert , Nicolas Pugeault

Climate change poses an extreme threat to biodiversity, making it imperative to efficiently model the geographical range of different species. The availability of large-scale remote sensing images and environmental data has facilitated the…

Computer Vision and Pattern Recognition · Computer Science 2024-12-30 Theresa Chen , Yao-Yi Chiang

Poaching poses significant threats to wildlife and biodiversity. A valuable step in reducing poaching is to forecast poacher behavior, which can inform patrol planning and other conservation interventions. Existing poaching prediction…

Machine Learning · Computer Science 2025-08-29 Lingkai Kong , Haichuan Wang , Charles A. Emogor , Vincent Börsch-Supan , Lily Xu , Milind Tambe

The spatial scale of population synchrony gives the characteristic distance at which the population fluctuations are correlated. Therefore, it gives also the characteristic size of the regions of simultaneous population depletion, or even…

Populations and Evolution · Quantitative Biology 2020-12-22 Miguel Ángel Fernández-Grande , Francisco Javier Cao-Garcia

1.) Spatio-temporal datasets that are difficult to analyze are common in ecological surveys. There are software packages available to analyze these datasets, but many of them require advanced coding skills. There is a growing need for easy…

Methodology · Statistics 2021-10-07 Ethan Lawler , Chris Field , Joanna Mills Flemming

Auto-logistic and related auto-models, implemented approximately as autocovariate regression, provide simple and direct modelling of spatial dependence. The autologistic model has been widely applied in ecology since Augustin, Mugglestone…

Quantitative Methods · Quantitative Biology 2015-05-01 David C. Bardos , Gurutzeta Guillera-Arroita , Brendan A. Wintle

1. Citizen and community-science (CS) datasets have great potential for estimating interannual patterns of population change given the large volumes of data collected globally every year. Yet, the flexible protocols that enable many CS…

This paper is concerned with the formulation of $N$-mixture models for estimating the abundance and probability of detection of a species from binary response, count and time-to-detection data. A modelling framework, which encompasses…

Methodology · Statistics 2023-09-27 Linda M Haines , Res Altwegg , David L. Borchers

The difficulty of monitoring biodiversity at fine scales and over large areas limits ecological knowledge and conservation efforts. To fill this gap, Species Distribution Models (SDMs) predict species across space from spatially explicit…

Computer Vision and Pattern Recognition · Computer Science 2024-12-12 Lukas Picek , Christophe Botella , Maximilien Servajean , César Leblanc , Rémi Palard , Théo Larcher , Benjamin Deneu , Diego Marcos , Pierre Bonnet , Alexis Joly

We address an important problem in ecology called Species Distribution Modeling (SDM), whose goal is to predict whether a species exists at a certain position on Earth. In particular, we tackle a challenging version of this task, where we…

Machine Learning · Computer Science 2024-10-24 Shiran Yuan , Hao Zhao

Mixture models are often used to identify meaningful subpopulations (i.e., clusters) in observed data such that the subpopulations have a real-world interpretation (e.g., as cell types). However, when used for subpopulation discovery,…

Methodology · Statistics 2024-03-04 Jiawei Li , Jonathan H. Huggins

We introduce a model for spatial statistics which can account explicitly for interactions among more than two field components at a time. The theoretical aspects of the model are dealt with: cumulant and moment generating functions, spatial…

Methodology · Statistics 2014-10-30 Rodríguez , Jhan , Bárdossy , András

In this article, a model, discrete in space and time, is developed to describe the growth and spread of the Scottish populations of red squirrels (Sciurus vulgaris) and grey squirrel (Sciurus carolinensis). The initial state for the model…

Populations and Evolution · Quantitative Biology 2023-04-21 Jean-Baptiste Gramain

Spatiotemporal processes have the potential to be one of the most influential factors governing how fisheries targeting sedentary species respond to harvesting. Despite this, management strategy evaluation often fails to account for space…

Populations and Evolution · Quantitative Biology 2021-09-07 Christopher D. Nottingham , Russell B. Millar