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The electrostatic contribution to spontaneous membrane curvature is calculated within Poisson-Boltzmann theory under a variety of assumptions and emphasizing parameters in the physiological range. Asymmetric surface charges, either fixed…

Condensed Matter · Physics 2009-10-28 Tom Chou , Marko V. Jaric' , Eric D. Siggia

The cell cortex is a thin layer beneath the plasma membrane that gives animal cells mechanical resistance and drives most of their shape changes, from migration, division to multicellular morphogenesis. It is mainly composed of actin…

Biological Physics · Physics 2022-05-04 Hudson Borja da Rocha , Jérémy Bleyer , Hervé Turlier

Exploiting the "natural" frame of space curves, we formulate an intrinsic dynamics of twisted elastic filaments in viscous fluids. A pair of coupled nonlinear equations describing the temporal evolution of the filament's complex curvature…

Soft Condensed Matter · Physics 2009-10-31 Raymond E. Goldstein , Thomas R. Powers , Chris H. Wiggins

We develop the mechanics of combined bending and twisting deformation of a one-dimensional filamentous structure with protruding stiff fish-scale-like plates embedded at an angle on the surface. We develop Cosserat kinematic formulation…

Soft Condensed Matter · Physics 2022-01-19 Sanjay Dharmavaram , Hossein Ebrahimi , Ranajay Ghosh

The shape assumed by a slender elastic structure is a function both of the geometry of the space in which it exists and the forces it experiences. We explore by experiments and theoretical analysis, the morphological phase-space of a…

Soft Condensed Matter · Physics 2023-12-11 S Ganga Prasath , Joel Marthelot , Rama Govindarajan , Narayanan Menon

The move to high performance applications greatly increases the demand to produce large instantaneous fluid forces for high-speed maneuvering and improved power efficiency for sustained propulsion. Animals achieve remarkable feats of…

Fluid Dynamics · Physics 2016-09-22 G D Weymouth

In recent years molecular elasticity has emerged as an active area of research: there are experiments that probe mechanical properties of single biomolecules such as DNA and Actin, with a view to understanding the role of elasticity of…

Physics Education · Physics 2007-05-23 Supurna Sinha

Active gels play an important role in biology and in inspiring biomimetic active materials, due to their ability to change shape, size and create their own morphology; the relevant mechanics behind these changes is driven by…

Soft Condensed Matter · Physics 2023-09-22 Anne Bernheim-Groswasser , Gefen Livne , Paola Nardinocchi , Filippo Recrosi , Luciano Teresi

The conformational free energy landscape of a system is a fundamental thermodynamic quantity of importance particularly in the study of soft matter and biological systems, in which the entropic contributions play a dominant role. While…

Biological Physics · Physics 2015-10-13 N. Ramakrishnan , Richard W. Tourdot , Ravi Radhakrishnan

We have advanced our previous static theory of polymer entanglement involving an extended Cahn-Hilliard functional, to include time-dependent dynamics. We go beyond the Gaussian approximation, to the one-loop level, to compute the frequency…

Soft Condensed Matter · Physics 2009-10-31 S. M. Chitanvis

A coarse-grained molecular model, which consists of a spherical particle and an orientation vector, is proposed to simulate lipid membrane on a large length scale. The solvent is implicitly represented by an effective attractive interaction…

Soft Condensed Matter · Physics 2015-05-20 Hiroshi Noguchi

We study a single, freely--floating, inextensible, elastic filament in a linear shear flow: $\mathbf{U}_{0}(x,y) = \dot{\gamma} y \hat{x}$. In our model: the elastic energy depends only on bending; the rate-of-strain, $\dot{\gamma} = S…

Soft Condensed Matter · Physics 2022-10-11 Vipin Agrawal , Dhrubaditya Mitra

Ferrogels and magnetoelastomers are composite materials obtained by embedding magnetic particles of mesoscopic size in a crosslinked polymeric matrix. They combine the reversible elastic deformability of polymeric materials with the high…

We systematically explore the self-assembly of semi-flexible polymers in deformable spherical confinement across a wide regime of chain stiffness, contour lengths and packing fractions by means of coarse-grained molecular dynamics…

Soft Condensed Matter · Physics 2021-07-12 Maxime M. C. Tortora , Daniel Jost

A fascinating and open question challenging biochemistry, physics and even geometry is the presence of highly regular motifs such as alpha-helices in the folded state of biopolymers and proteins. Stimulating explanations ranging from…

Statistical Mechanics · Physics 2009-10-31 Amos Maritan , Cristian Micheletti , Jayanth R. Banavar

A novel bilayer is introduced, consisting of a stiff film adhered to a soft substrate with patterned holes beneath the film and substrate interface. To uncover the transition of surface patterns, two dimensional plane strain simulations are…

Soft Condensed Matter · Physics 2017-04-07 Xiangbiao Liao , Liangliang Zhu , Hang Xiao , Junan Pan , Feng Hao , Xiaoyang Shi , Xi Chen

Using a geometrically motivated 8-parameter ansatz through the thickness, we reduce a three-dimensional shell-like geometrically nonlinear Cosserat material to a fully two-dimensional shell model. Curvature effects are fully taken into…

Analysis of PDEs · Mathematics 2019-09-30 Mircea Birsan , Ionel-Dumitrel Ghiba , Robert J. Martin , Patrizio Neff

From multicellular tissues to bacterial colonies, three dimensional cellular structures arise through the interaction of cellular activities and mechanical forces. Simple bacterial communities provide model systems for analyzing such…

Soft Condensed Matter · Physics 2024-01-11 Ana Carpio , Elena Cebrian , David R. Espeso , Perfecto Vidal

We preset a computational study of bending models for the curvature elasticity of lipid bilayer membranes that are relevant for simulations of vesicles and red blood cells. We compute bending energy and forces on triangulated meshes and…

Computational Engineering, Finance, and Science · Computer Science 2020-01-08 Xin Bian , Sergey Litvinov , Petros Koumoutsakos

Active elastomeric liquid crystal particles with initial cylindrical shapes are obtained by means of soft lithography and polymerization in a strong magnetic field. Gold nanocrystals infiltrated into these particles mediate energy transfer…

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