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Related papers: Systematic Analysis of COVID-19 Ontologies

200 papers

This research presents a review of main datasets that are developed for COVID-19 research. We hope this collection will continue to bring together members of the computing community, biomedical experts, and policymakers in the pursuit of…

Computers and Society · Computer Science 2022-07-28 Syed Raza Bashir , Shaina Raza , Vidhi Thakkar , Usman Naseem

The COVID-19 pandemic represents the most significant public health disaster since the 1918 influenza pandemic. During pandemics such as COVID-19, timely and reliable spatio-temporal forecasting of epidemic dynamics is crucial. Deep…

Machine Learning · Computer Science 2020-11-25 Lijing Wang , Aniruddha Adiga , Srinivasan Venkatramanan , Jiangzhuo Chen , Bryan Lewis , Madhav Marathe

Accurate numbers are needed to understand and predict viral dynamics. Curation of high-quality literature values for the infectious period duration or household secondary attack rate, for example, is especially pressing currently because…

Other Quantitative Biology · Quantitative Biology 2020-07-10 Yinon M. Bar-On , Ron Sender , Avi I. Flamholz , Rob Phillips , Ron Milo

The great challenge for the humanity of the year 2020 is the fight against COVID-19. The whole world is making a huge effort to find an effective vaccine with purpose to protect people not yet infected. The alternative solution remains…

Image and Video Processing · Electrical Eng. & Systems 2020-12-03 Mario Manzo , Simone Pellino

Scientific literature tends to grow as a function of funding and interest in a given field. Mining such literature can reveal trends that may not be immediately apparent. The CORD-19 corpus represents a growing corpus of scientific…

Other Quantitative Biology · Quantitative Biology 2021-01-29 James Powell , Kari Sentz

The development of conversational agents to interact with patients and deliver clinical advice has attracted the interest of many researchers, particularly in light of the COVID-19 pandemic. The training of an end-to-end neural based dialog…

Computation and Language · Computer Science 2022-12-13 Deeksha Varshney , Aizan Zafar , Niranshu Kumar Behra , Asif Ekbal

Introduction: For COVID-19 patients accurate prediction of disease severity and mortality risk would greatly improve care delivery and resource allocation. There are many patient-related factors, such as pre-existing comorbidities that…

Phenomenological and deterministic models are often used for the estimation of transmission parameters in an epidemic and for the prediction of its growth trajectory. Such analyses are usually based on single peak outbreak dynamics. In…

Populations and Evolution · Quantitative Biology 2022-01-20 D. P. Mahapatra , S. Triambak

Background. After a year and half and over 4 million deaths, the COVID-19 pandemic continues to be widespread, and its related topics continue to dominate the global media. Although COVID-19 diagnoses have been well monitored, neither the…

Computers and Society · Computer Science 2021-08-19 Guangqing Chi , Junjun Yin , M. Luke Smith , Yosef Bodovski

In this paper, we present Knowledge4COVID-19, a framework that aims to showcase the power of integrating disparate sources of knowledge to discover adverse drug effects caused by drug-drug interactions among COVID-19 treatments and…

Large language models have demonstrated remarkable capabilities across a wide range of tasks, yet their ability to process structured symbolic knowledge remains underexplored. To address this gap, we propose a taxonomy of ontological…

Computation and Language · Computer Science 2025-10-03 Xiao Zhang , Huiyuan Lai , Qianru Meng , Johan Bos

We extract entities and relationships related to COVID-19 from a corpus of articles related to Corona virus by employing a novel entities and relationship model. The entity recognition and relationship discovery models are trained with a…

Computation and Language · Computer Science 2020-09-08 Kuldeep Singh , Puneet Singla , Ketan Sarode , Anurag Chandrakar , Chetan Nichkawde

Public policy must confront emergencies that evolve in real time and in uncertain directions, yet little is known about the nature of policy response. Here we take the coronavirus pandemic as a global and extraordinarily consequential case,…

Physics and Society · Physics 2020-06-25 Jian Gao , Yian Yin , Benjamin F. Jones , Dashun Wang

The World Health Organization (WHO) announced that COVID-19 was a pandemic disease on the 11th of March as there were 118K cases in several countries and territories. Numerous researchers worked on forecasting the number of confirmed cases…

Machine Learning · Computer Science 2020-11-10 Hoang Long Nguyen , Zhenhe Pan , Hashim Abu-gellban , Fang Jin , Yuanlin Zhang

Foundation models have emerged as a powerful paradigm in computational pathology (CPath), enabling scalable and generalizable analysis of histopathological images. While early developments centered on uni-modal models trained solely on…

Computer Vision and Pattern Recognition · Computer Science 2025-03-21 Dong Li , Guihong Wan , Xintao Wu , Xinyu Wu , Xiaohui Chen , Yi He , Christine G. Lian , Peter K. Sorger , Yevgeniy R. Semenov , Chen Zhao

Radiographic images offer an alternative method for the rapid screening and monitoring of Coronavirus Disease 2019 (COVID-19) patients. This approach is limited by the shortage of radiology experts who can provide a timely interpretation of…

Image and Video Processing · Electrical Eng. & Systems 2020-04-17 Aryan Mobiny , Pietro Antonio Cicalese , Samira Zare , Pengyu Yuan , Mohammadsajad Abavisani , Carol C. Wu , Jitesh Ahuja , Patricia M. de Groot , Hien Van Nguyen

Fast and affordable solutions for COVID-19 testing are necessary to contain the spread of the global pandemic and help relieve the burden on medical facilities. Currently, limited testing locations and expensive equipment pose difficulties…

Sound · Computer Science 2021-03-18 Ahmed Fakhry , Xinyi Jiang , Jaclyn Xiao , Gunvant Chaudhari , Asriel Han , Amil Khanzada

Under the pandemic of COVID-19, people experiencing COVID19-related symptoms or exposed to risk factors have a pressing need to consult doctors. Due to hospital closure, a lot of consulting services have been moved online. Because of the…

Computation and Language · Computer Science 2020-06-19 Wenmian Yang , Guangtao Zeng , Bowen Tan , Zeqian Ju , Subrato Chakravorty , Xuehai He , Shu Chen , Xingyi Yang , Qingyang Wu , Zhou Yu , Eric Xing , Pengtao Xie

Ontologies in the biomedical domain are numerous, highly specialized and very expensive to develop. Thus, a crucial prerequisite for ontology adoption and reuse is effective support for exploring and finding existing ontologies. Towards…

Social and Information Networks · Computer Science 2022-05-17 Simon Walk , Lisette Espín-Noboa , Denis Helic , Markus Strohmaier , Mark Musen

The global pandemic has made it more important than ever to quickly and accurately retrieve relevant scientific literature for effective consumption by researchers in a wide range of fields. We provide an analysis of several multi-label…

Information Retrieval · Computer Science 2020-09-11 Bernal Jiménez Gutiérrez , Juncheng Zeng , Dongdong Zhang , Ping Zhang , Yu Su