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Within the nucleus, structural maintenance of chromosome protein complexes, namely condensin and cohesin, create an architecture to facilitate the organization and proper function of the genome. Condensin, in addition to performing loop…

Biological Physics · Physics 2024-07-01 Anna Coletti , Benjamin Walker , Kerry Bloom , Katherine Newhall

The presence of one or more species at some spatial locations but not others is a central matter in ecology. This phenomenon is related to ecological pattern formation. Nonlocal interactions can be considered as one of the mechanisms…

Populations and Evolution · Quantitative Biology 2017-12-29 Ozgur Aydogmus

The emergence of localised vibrations in cyclic and symmetric rotating structures, such as bladed disks of aircraft engines, has challenged engineers in the past few decades. In the linear regime, localised states may arise due to a lack of…

Pattern Formation and Solitons · Physics 2018-09-26 Filipe Fontanela , Aurelien Grolet , Loic Salles , Amin Chabchoub , Alan Champneys , Sophoclis Patsias , Norbert Hoffmann

Soft solids with tunable mechanical response are at the core of new material technologies, but a crucial limit for applications is their progressive aging over time, which dramatically affects their functionalities. The generally accepted…

Soft Condensed Matter · Physics 2017-08-02 Mehdi Bouzid , Jader Colombo , Lucas Vieira Barbosa , Emanuela Del Gado

Steady progress in the miniaturization of structures and devices has reached a scale where thermal fluctuations become relevant and it is thus important to understand how such fluctuations affect their mechanical stability. Here, we…

Soft Condensed Matter · Physics 2021-02-24 Ali Morshedifard , Miguel Ruiz-Garcia , Mohammad Javad Abdolhosseini Qomi , Andrej Kosmrlj

Equations for dislocation evolution bridge the gap between dislocation properties and continuum descriptions of plastic behavior of crystalline materials. Computer simulations can help us verify these evolution equations and find their…

Materials Science · Physics 2020-11-11 Kamyar M. Davoudi , Joost J. Vlassak

We perform large scale simulations of a two dimensional lattice model for amorphous plasticity with random local yield stresses and long-range quadrupolar elastic interactions. We show that as the external stress increases towards the…

Soft Condensed Matter · Physics 2013-12-12 Zoe Budrikis , Stefano Zapperi

We have imagined a numerical experiment to explore the onset of turbulent intermittency associated with a spatial perturbation of the correlation length. We place two isotropic regions, with different integral scales, inside a volume where…

Fluid Dynamics · Physics 2012-11-29 Daniela Tordella , Michele Iovieno

When a thin elastic sheet is confined to a region much smaller than its size the morphology of the resulting crumpled membrane is a network of straight ridges or folds that meet at sharp vertices. A virial theorem predicts the ratio of the…

Condensed Matter · Physics 2009-10-28 Alexander E. Lobkovsky , T. A. Witten

We report on a simulational study of the compression and buckling of elastic ridges formed by joining the boundary of a flat sheet to itself. Such ridges store energy anomalously: their resting energy scales as the linear size of the sheet…

Condensed Matter · Physics 2009-11-07 B. A. DiDonna , T. A. Witten

The paper continues a series of publications devoted to the 3D nonlinear localized coherent structures on the surface of vertically falling liquid films. The work is primarily focussed on experimental investigations. We study: (i)…

Fluid Dynamics · Physics 2015-05-18 E. A. Demekhin , E. N. Kalaidin , A. S. Selin

The thermal decay of linear chains from a metastable state is investigated. A crossover from rigid to elastic decay occurs when the number of particles, the single particle energy barrier or the coupling strength between the particles is…

Superconductivity · Physics 2009-10-31 Thorsten Droese , Cristiane Morais-Smith

Periodic wrinkling of a rigid capping layer on a deformable substrate provides a useful method for templating surface topography for a variety of novel applications. Many experiments have studied wrinkle formation during the compression of…

Soft Condensed Matter · Physics 2020-04-21 John F. Niven , Gurkaran Chowdhry , James S. Sharp , Kari Dalnoki-Veress

The instability, dynamics and morphological transitions of patterns in thin liquid films on periodic striped surfaces (consisting of alternating less and more wettable stripes) are investigated based on 3-D nonlinear simulations that…

Soft Condensed Matter · Physics 2009-11-07 K. Kargupta , A. Sharma

For particles confined to two dimensions, any curvature of the surface affects the structural, kinetic and thermodynamic properties of the system. If the curvature is non-uniform, an even richer range of behaviours can emerge. Using a…

Soft Condensed Matter · Physics 2020-08-10 Jack O. Law , Jacob M. Dean , Mark A. Miller , Halim Kusumaatmaja

Nucleation and growth is the dominant relaxation mechanism driving first order phase transitions. In two-dimensional at systems nucleation has been applied to a wide range of problems in physics, chemistry and biology. Here we study…

Soft Condensed Matter · Physics 2016-03-09 Leopoldo R. Gomez , Nicolas A. Garcia , Vincenzo Vitelli , Jose Lorenzana , Daniel A. Vega

The decay of a crystalline cone below the roughening transition is studied. We consider local mass transport through surface diffusion, focusing on the two cases of diffusion limited and attachment-detachment limited step kinetics. In both…

Materials Science · Physics 2009-10-31 Navot Israeli , Daniel Kandel

Plastic deformation In crystalline materials is controlled by the motion and interactions of dislocations [AND 17]. Discrete Dislocation Dynamics (DDD) simulations have now existed for about 25 years to investigate plastic flow at the…

Materials Science · Physics 2020-01-07 Sylvain Queyreau

We study the deformation of a fluctuating crystalline sheet confined between two flat rigid walls as a simple model for layered solids where bonds among atoms {\it within} the same layer are much stronger than those {\it between} layers.…

Soft Condensed Matter · Physics 2020-07-02 Debankur Das , Jürgen Horbach , Peter Sollich , Tanusri Saha-Dasgupta , Surajit Sengupta

Spontaneous strain localization occurs during mechanical tests of a model amorphous solid simulated using molecular dynamics. The degree of localization depends upon the extent of structural relaxation prior to mechanical testing. In the…

Materials Science · Physics 2007-05-23 Yunfeng Shi , Michael L. Falk
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