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Unraveling the complexities of Gene Regulatory Networks (GRNs) is crucial for understanding cellular processes and disease mechanisms. Traditional computational methods often struggle with the dynamic nature of these networks. This study…

Machine Learning · Computer Science 2025-03-04 Hakan T. Otal , Abdulhamit Subasi , Furkan Kurt , M. Abdullah Canbaz , Yasin Uzun

Many popular variants of graph neural networks (GNNs) that are capable of handling multi-relational graphs may suffer from vanishing gradients. In this work, we propose a novel GNN architecture based on the Gated Graph Neural Network with…

Machine Learning · Computer Science 2020-07-21 Denis Lukovnikov , Jens Lehmann , Asja Fischer

We introduce Graph Neural Processes (GNP), inspired by the recent work in conditional and latent neural processes. A Graph Neural Process is defined as a Conditional Neural Process that operates on arbitrary graph data. It takes features of…

Machine Learning · Computer Science 2019-10-03 Andrew Carr , David Wingate

Graph representation learning has achieved a remarkable success in many graph-based applications, such as node classification, link prediction, and community detection. These models are usually designed to preserve the vertex information at…

Social and Information Networks · Computer Science 2020-01-22 Kangfei Zhao , Yu Rong , Jeffrey Xu Yu , Junzhou Huang , Hao Zhang

Recommender systems play a crucial role in addressing the issue of information overload by delivering personalized recommendations to users. In recent years, there has been a growing interest in leveraging graph neural networks (GNNs) for…

Information Retrieval · Computer Science 2023-06-09 Ziyang Liu , Chaokun Wang , Jingcao Xu , Cheng Wu , Kai Zheng , Yang Song , Na Mou , Kun Gai

Graph neural networks (GNNs) are a popular class of machine learning models whose major advantage is their ability to incorporate a sparse and discrete dependency structure between data points. Unfortunately, GNNs can only be used when such…

Machine Learning · Computer Science 2020-06-22 Luca Franceschi , Mathias Niepert , Massimiliano Pontil , Xiao He

Graph neural networks (GNNs) have become compelling models designed to perform learning and inference on graph-structured data. However, little work has been done to understand the fundamental limitations of GNNs for scaling to larger…

Machine Learning · Computer Science 2023-10-27 Hyungeun Lee , Kijung Yoon

Predictions over graphs play a crucial role in various domains, including social networks and medicine. Graph Neural Networks (GNNs) have emerged as the dominant approach for learning on graph data. Although a graph-structure is provided as…

Machine Learning · Computer Science 2024-02-27 Maya Bechler-Speicher , Ido Amos , Ran Gilad-Bachrach , Amir Globerson

The rise of graph representation learning as the primary solution for many different network science tasks led to a surge of interest in the fairness of this family of methods. Link prediction, in particular, has a substantial social…

Machine Learning · Computer Science 2023-02-23 Indro Spinelli , Riccardo Bianchini , Simone Scardapane

Document structure analysis, such as zone segmentation and table recognition, is a complex problem in document processing and is an active area of research. The recent success of deep learning in solving various computer vision and machine…

Computer Vision and Pattern Recognition · Computer Science 2019-07-04 Shah Rukh Qasim , Hassan Mahmood , Faisal Shafait

Traditional verification methods in chip design are highly time-consuming and computationally demanding, especially for large scale circuits. Graph neural networks (GNNs) have gained popularity as a potential solution to improve…

Machine Learning · Computer Science 2025-12-15 Kiran Thorat , Hongwu Peng , Yuebo Luo , Xi Xie , Shaoyi Huang , Amit Hasan , Jiahui Zhao , Yingjie Li , Zhijie Shi , Cunxi Yu , Caiwen Ding

Designing a high-efficiency and high-quality expressive network architecture has always been the most important research topic in the field of deep learning. Most of today's network design strategies focus on how to integrate features…

Computer Vision and Pattern Recognition · Computer Science 2022-11-10 Chien-Yao Wang , Hong-Yuan Mark Liao , I-Hau Yeh

Higher-order graph neural networks (HOGNNs) and the related architectures from Topological Deep Learning are an important class of GNN models that harness polyadic relations between vertices beyond plain edges. They have been used to…

Although Graph Neural Networks (GNNs) have exhibited the powerful ability to gather graph-structured information from neighborhood nodes via various message-passing mechanisms, the performance of GNNs is limited by poor generalization and…

Machine Learning · Computer Science 2024-08-15 Zhaoliang Chen , Zhihao Wu , Ylli Sadikaj , Claudia Plant , Hong-Ning Dai , Shiping Wang , Yiu-Ming Cheung , Wenzhong Guo

Graph neural networks (GNNs) use graph convolutions to exploit network invariances and learn meaningful feature representations from network data. However, on large-scale graphs convolutions incur in high computational cost, leading to…

Machine Learning · Computer Science 2022-06-29 Juan Cervino , Luana Ruiz , Alejandro Ribeiro

Graph Neural Networks (GNNs) have become powerful tools for learning from graph-structured data, finding applications across diverse domains. However, as graph sizes and connectivity increase, standard GNN training methods face significant…

Machine Learning · Computer Science 2025-12-01 Eshed Gal , Moshe Eliasof , Carola-Bibiane Schönlieb , Ivan I. Kyrchei , Eldad Haber , Eran Treister

Graph Neural Networks (GNNs) have recently emerged as a promising approach to tackling power allocation problems in wireless networks. Since unpaired transmitters and receivers are often spatially distant, the distance-based threshold is…

Information Theory · Computer Science 2024-06-04 Lili Chen , Jingge Zhu , Jamie Evans

Graph Neural Networks (GNNs) are a popular approach for predicting graph structured data. As GNNs tightly entangle the input graph into the neural network structure, common explainable AI approaches are not applicable. To a large extent,…

In recent years, deep neural networks (DNNs) have known an important rise in popularity. However, although they are state-of-the-art in many machine learning challenges, they still suffer from several limitations. For example, DNNs require…

Machine Learning · Computer Science 2021-10-11 Carlos Lassance , Myriam Bontonou , Mounia Hamidouche , Bastien Pasdeloup , Lucas Drumetz , Vincent Gripon

Graph Neural Networks (GNNs) have emerged as powerful tools for learning representations from structured data. Despite their growing popularity and success across various applications, GNNs encounter several challenges that limit their…

Machine Learning · Computer Science 2026-02-03 Yassine Abbahaddou
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