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Decoding stimuli or behaviour from recorded neural activity is a common approach to interrogate brain function in research, and an essential part of brain-computer and brain-machine interfaces. Reliable decoding even from small neural…

Neurons and Cognition · Quantitative Biology 2023-01-06 Justin Jude , Matthew G. Perich , Lee E. Miller , Matthias H. Hennig

The availability of large-scale neuronal population datasets necessitates new methods to model population dynamics and extract interpretable, scientifically translatable insights. Existing deep learning methods often overlook the biological…

Neurons and Cognition · Quantitative Biology 2024-11-14 Parsa Delavari , Ipek Oruc , Timothy H Murphy

Complex time-varying systems are often studied by abstracting away from the dynamics of individual components to build a model of the population-level dynamics from the start. However, when building a population-level description, it can be…

Neurons and Cognition · Quantitative Biology 2022-10-21 Ran Liu , Mehdi Azabou , Max Dabagia , Jingyun Xiao , Eva L. Dyer

Neurons can code for multiple variables simultaneously and neuroscientists are often interested in classifying neurons based on their receptive field properties. Statistical models provide powerful tools for determining the factors…

Neurons and Cognition · Quantitative Biology 2022-10-28 Mehrad Sarmashghi , Shantanu P. Jadhav , Uri T. Eden

Neural population activity relating to behaviour is assumed to be inherently low-dimensional despite the observed high dimensionality of data recorded using multi-electrode arrays. Therefore, predicting behaviour from neural population…

Neurons and Cognition · Quantitative Biology 2022-02-17 Justin Jude , Matthew G Perich , Lee E Miller , Matthias H Hennig

The principles of neural encoding and computations are inherently collective and usually involve large populations of interacting neurons with highly correlated activities. While theories of neural function have long recognized the…

Neurons and Cognition · Quantitative Biology 2019-05-14 Christophe Gardella , Olivier Marre , Thierry Mora

Deep learning yields great results across many fields, from speech recognition, image classification, to translation. But for each problem, getting a deep model to work well involves research into the architecture and a long period of…

Machine Learning · Computer Science 2017-06-19 Lukasz Kaiser , Aidan N. Gomez , Noam Shazeer , Ashish Vaswani , Niki Parmar , Llion Jones , Jakob Uszkoreit

This paper introduces decentralized and modular neural network framework designed to enhance the scalability, interpretability, and performance of artificial intelligence (AI) systems. At the heart of this framework is a dynamic switch…

Neural and Evolutionary Computing · Computer Science 2025-04-28 Surajit Majumder , Paritosh Ranjan , Prodip Roy , Bhuban Padhan

Predicting future neural activity is a core challenge in modeling brain dynamics, with applications ranging from scientific investigation to closed-loop neurotechnology. While recent models of population activity emphasize interpretability…

Neurons and Cognition · Quantitative Biology 2026-02-11 Yu Duan , Hamza Tahir Chaudhry , Misha B. Ahrens , Christopher D Harvey , Matthew G Perich , Karl Deisseroth , Kanaka Rajan

Neuroscience research has made immense progress over the last decade, but our understanding of the brain remains fragmented and piecemeal: the dream of probing an arbitrary brain region and automatically reading out the information encoded…

Recent achievements in implantable brain-computer interfaces (iBCIs) have demonstrated the potential to decode cognitive and motor behaviors with intracranial brain recordings; however, individual physiological and electrode implantation…

Neurons and Cognition · Quantitative Biology 2025-06-17 Di Wu , Linghao Bu , Yifei Jia , Lu Cao , Siyuan Li , Siyu Chen , Yueqian Zhou , Sheng Fan , Wenjie Ren , Dengchang Wu , Kang Wang , Yue Zhang , Yuehui Ma , Jie Yang , Mohamad Sawan

Recent work has demonstrated that large-scale, multi-animal models are powerful tools for characterizing the relationship between neural activity and behavior. Current large-scale approaches, however, focus exclusively on either predicting…

We present a self-supervised framework that learns population-level codes for arbitrary ensembles of neural recordings at scale. We address key challenges in scaling models with neural time-series data, namely, sparse and variable electrode…

Humans can learn a variety of concepts and skills incrementally over the course of their lives while exhibiting many desirable properties, such as continual learning without forgetting, forward transfer and backward transfer of knowledge,…

Artificial Intelligence · Computer Science 2021-05-04 Charles X. Ling , Tanner Bohn

Deep learning applications are drastically progressing in seismic processing and interpretation tasks. However, the majority of approaches subsample data volumes and restrict model sizes to minimise computational requirements. Subsampling…

Geophysics · Physics 2021-02-26 Claire Birnie , Haithem Jarraya , Fredrik Hansteen

Deep learning and large public datasets have recently catalyzed the proliferation of AI models for processing brain recordings. However, systematically evaluating these models remains a challenge: not only do the preprocessing pipelines,…

A major goal in neuroscience is to understand how populations of neurons code for stimuli or actions. While the number of neurons that can be recorded simultaneously is increasing at a fast pace, in most cases these recordings cannot access…

Neurons and Cognition · Quantitative Biology 2019-04-10 Oleksandr Sorochynskyi , Stéphane Deny , Olivier Marre , Ulisse Ferrari

Large-scale models have exhibited remarkable capabilities across diverse domains, including automated medical services and intelligent customer support. However, as most large models are trained on single-modality corpora, enabling them to…

Computer Vision and Pattern Recognition · Computer Science 2025-08-26 Hao Sun , Yu Song , Jiaqing Liu , Jihong Hu , Yen-Wei Chen , Lanfen Lin

Brain activity is intrinsically a neural dynamic process constrained by anatomical space. This leads to significant variations in spatial distribution patterns and correlation patterns of neural activity across variable and heterogeneous…

Machine Learning · Computer Science 2026-03-10 Hongjie Jiang , Yifei Tang , Shuqiang Wang

Decoding behavior, perception, or cognitive state directly from neural signals has applications in brain-computer interface research as well as implications for systems neuroscience. In the last decade, deep learning has become the…

Neurons and Cognition · Quantitative Biology 2020-05-21 Jesse A. Livezey , Joshua I. Glaser
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